| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_3527 |
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| Symbol | ispB |
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| ID | 4902349 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1106a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009076 |
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| Strand | + |
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| Start bp | 3431150 |
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| End bp | 3432148 |
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| Gene Length | 999 bp |
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| Protein Length | 332 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640136753 |
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| Product | octaprenyl-diphosphate synthase |
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| Protein accession | YP_001067764 |
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| Protein GI | 126451455 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0142] Geranylgeranyl pyrophosphate synthase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.491243 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCATGT CGTCGACTGC CACCCCTTCC CTCAGCGCCG CCCACCTGCT CGCACCGATC
GCAAGCGACA TGGAGCAGGT GAATCGCGTC ATTCGGCAAA GCCTCGCGTC CGACGTGCTG
CTGATCAATC AGATCGCCGA GTACATCATC GGCGCGGGCG GCAAACGGCT GCGGCCGGCG
CTTCTTCTGC TCGTCGCGGG CGCGCTCGGC GAAAACACGA ACCAGAAGCA CGTGCTCGCG
GCCGTCGTCG AATTCATCCA TACGGCGACG CTGCTGCACG ACGACGTCGT CGACGAATCC
GAGCTGCGGC GCGGCCGCAA GACTGCGAAC GCACTGTTCG GCAATGCGGC GAGCGTGCTT
GTCGGCGATT ACCTCTATTC GCGCTCGTTC GAGATGATGG TGGGCGTCGG CAAGATGCGC
GTGATGGAAA TCCTGTCCGA AGCGACGACG ATCATCTCCG AAGGCGAAGT GCTGCAATTG
CTGAACATGC ACGATGCGGA CGTCGACGAA GCCCGCTACA TGCAGGTGAT CCGCTATAAG
ACCGCGAAGC TGTTCGAAGC GGCCGCGCGG CTCGGCGCGG TGCTCGCCGG CGCCGACGCG
CCGACGGAAG CCGCCGCGGC CGAGTACGGC CGCCGGATCG GCACCGCGTT CCAGATCATG
GACGACTGGC TCGACTATGC GGGCACCGCC GAATCGATGG GCAAGAACGC CGGCGACGAC
CTGCGCGAAG GCAAGCCGAC GCTGCCGCTC ATCTATCTGA TCGAGCGCGG CACGCCCGAG
CAGTCGACAC TCGCGCGCGA AGCGATCGAG CACGGCGGTA CCGATCGCTT CGACACGATT
TTCGACGCGA TCACGCGTTC GGGCGCGCTC GACCATACGC TCGAATGCGC TCGCCAAGAA
GCGCAGGCGG CCGCAGCAGC AATTTCTTCA TTTCCCTCTT CCAATTTCAA AGAGAGCCTG
CTAGAATTAT GCTCTTACTC GACGTCACGT CAGTCTTGA
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| Protein sequence | MIMSSTATPS LSAAHLLAPI ASDMEQVNRV IRQSLASDVL LINQIAEYII GAGGKRLRPA
LLLLVAGALG ENTNQKHVLA AVVEFIHTAT LLHDDVVDES ELRRGRKTAN ALFGNAASVL
VGDYLYSRSF EMMVGVGKMR VMEILSEATT IISEGEVLQL LNMHDADVDE ARYMQVIRYK
TAKLFEAAAR LGAVLAGADA PTEAAAAEYG RRIGTAFQIM DDWLDYAGTA ESMGKNAGDD
LREGKPTLPL IYLIERGTPE QSTLAREAIE HGGTDRFDTI FDAITRSGAL DHTLECARQE
AQAAAAAISS FPSSNFKESL LELCSYSTSR QS
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