Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1106A_3361 |
Symbol | tgt |
ID | 4902970 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1106a |
Kingdom | Bacteria |
Replicon accession | NC_009076 |
Strand | + |
Start bp | 3281938 |
End bp | 3283356 |
Gene Length | 1419 bp |
Protein Length | 472 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640136587 |
Product | queuine tRNA-ribosyltransferase |
Protein accession | YP_001067598 |
Protein GI | 126454794 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0343] Queuine/archaeosine tRNA-ribosyltransferase |
TIGRFAM ID | [TIGR00430] tRNA-guanine transglycosylase, queuosine-34-forming [TIGR00449] tRNA-guanine transglycosylases, various specificities |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.0872044 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | TTGGCCCATC GGCCGAACAG CCGATCAGCC GATCGTTCGA TTGGCTGTTC GGCTGTTCGG CTGTTCGGCG GCTCGGCGGC TCGGCGGCTC GGCGGCAAGG TAACGACGAT CGCGCGCCGA ACCGCCGCGA GCCGCGCTTC ACTTTTTTCC TTCGCGGCAA GCCGACGGCT CGCCGCGCCT TCAACATGCG CCGGACTGTA TTCCGGTGGC AAGGAGTCCA ACCAGATGAC GACCGAAGGT CCATCGCACG ATACGCACGA TACCTCCGCG GGCATTCGCC CGCACGGCGG CCTGAAATTC GAACTGCTGA CGACCGACGG CCGCGCACGG CGCGGCCGCG TGACGCTCAA TCACGGCGTC GTCGAGACGC CGATCTTCAT GCCGGTCGGC ACGTACGGCA CCGTGAAGGC CGTGCAGCCG CGCGAACTCG ACGAAATGCG CGCGCAGATC ATCCTCGGCA ACACGTTCCA CCTGTGGCTG CGCCCCGGCC TCGAGACGAT CGGCGCGCAC GGCGGGCTGC ACCGCTTCAT GGGCTGGAAC AAGCCGATCC TCACCGATTC GGGCGGCTTC CAGGTGTTCT CGCTCGGCGA TCTGCGCAAG ATCACCGAGG AAGGCGTCAC GTTCGCGTCG CCGATCAACG GCGATCGGCT GTTCCTGTCG CCGGAAGTGT CGATGCAGAT CCAGAAGACG CTGAATTCCG ACATCGTGAT GCAGTTCGAC GAATGCACGC CGTACGCGAC GAACGGCGTG CCGACGACGC ACCGGGAAGC GGCCGAATCG ATGCGGATGT CGCTGCGCTG GGCGAAGCGC TCGCTCGACG AATTCGAGCG CCTCGGCAAC CCGAACGCGC TGTTCGGCAT CGTGCAGGGC GGGATGTACG AGGACCTGCG CGACGAATCG CTCGCCGGGC TCTCGGCGCT CGGCTTCCAC GGCCTCGCGA TCGGCGGGCT GTCGGTCGGC GAGCCGAAGG AGGACATGAT GCGCGTGCTC GAGCACGTCG CGCCGCGCCT GCCCGCCGAC AAGCCGCACT ACCTGATGGG CGTGGGCACG CCGGAGGATC TCGTCGCGGG TGTCGCGGCG GGCGTCGACA TGTTCGACTG CGTGATGCCG ACCCGCAACG CGCGCAACGG CTGGCTCTTC ACGCGCCTCG GCGACGTGAA GATCCGCAAC GCGACGCACA AGAATTCGCT CAAGCCGCTC GACGAGACCT GCGGCTGCTA TACGTGCCGG AATTTCTCGC GCGGCTACCT GCATCATCTG CACCGCGTCG GCGAGATTCT CGGCGCGCAG TTGAACACGA TCCACAACCT GCACTACTAC CTCGATCTGA TGCGCGAGAT CCGCGAGGCG ATCGAGACGC ACACGTTCGA CGCGTTCCAA AAGCGCTTCG CGCAGGACCG CGCGCGCGGC GTCGACTGA
|
Protein sequence | MAHRPNSRSA DRSIGCSAVR LFGGSAARRL GGKVTTIARR TAASRASLFS FAASRRLAAP STCAGLYSGG KESNQMTTEG PSHDTHDTSA GIRPHGGLKF ELLTTDGRAR RGRVTLNHGV VETPIFMPVG TYGTVKAVQP RELDEMRAQI ILGNTFHLWL RPGLETIGAH GGLHRFMGWN KPILTDSGGF QVFSLGDLRK ITEEGVTFAS PINGDRLFLS PEVSMQIQKT LNSDIVMQFD ECTPYATNGV PTTHREAAES MRMSLRWAKR SLDEFERLGN PNALFGIVQG GMYEDLRDES LAGLSALGFH GLAIGGLSVG EPKEDMMRVL EHVAPRLPAD KPHYLMGVGT PEDLVAGVAA GVDMFDCVMP TRNARNGWLF TRLGDVKIRN ATHKNSLKPL DETCGCYTCR NFSRGYLHHL HRVGEILGAQ LNTIHNLHYY LDLMREIREA IETHTFDAFQ KRFAQDRARG VD
|
| |