Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1106A_3140 |
Symbol | rfbA |
ID | 4901453 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1106a |
Kingdom | Bacteria |
Replicon accession | NC_009076 |
Strand | - |
Start bp | 3062013 |
End bp | 3062906 |
Gene Length | 894 bp |
Protein Length | 297 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640136366 |
Product | glucose-1-phosphate thymidylyltransferase |
Protein accession | YP_001067378 |
Protein GI | 126451933 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1209] dTDP-glucose pyrophosphorylase |
TIGRFAM ID | [TIGR01207] glucose-1-phosphate thymidylyltransferase, short form |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGCGCA AGGGCATTAT TCTGGCCGGC GGTTCCGGCA CGCGGCTGTA TCCGATCACG CATGCGGTGT CGAAGCAGCT GTTGCCGGTC TACGACAAGC CGATGATCTA TTACCCGCTG TCGACGCTGA TGGTGGCGGA CATTCGCGAT GTGCTGATCA TCTCGACGCC GCAGGACACG CCGCGCTTCG AGGCGATGCT GGGTGACGGC AGCCAGTGGG GGATGAACAT CCGCTACGCG GTGCAGCCGT CGCCGGACGG GCTCGCGCAG GCGTTCGTGA TCGGCCGGGA ATTCGTCGGC CGCGATCCGT CGACGCTGAT TCTCGGCGAC AACATCTTCT ATGGCCACGA TCTCGCGAAG CAACTCGATC GGGCATCGGC GCGGCAGGCG GGTGCGACGG TGTTCGCATA CCACGTGCAC GATCCGGAGC GCTACGGCGT CGTCGAGTTC GACGGCGAAT TCCGCGCGCT GTCGATCGAG GAGAAGCCCG CGAAGCCGCG CTCGAACTAC GCGGTGACGG GGCTGTACTT CTACGACAAC CAGGTGTGCG ACATCGCGGC GGACATCAAG CCGTCCGCGC GCGGCGAGCT GGAGATCACG GACGTGAATT CCCGCTATCT CGCCGCGGGT TTGCTCGACG TCGAGATCAT GGGCCGCGGC TACGCGTGGC TCGATACCGG CACGCACGAT TCGCTGATCG AGGCGGCGAC GTTCATCGCG ACGCTGCAAA AGCGCCAGGG GCTCGTCGTC GCGTGTCCGG AGGAGATCGC GTATCGGCGG CAGTGGATCG ACGCGGAACA ACTGCTCAAG CTCGCACAGC CTTTGTCGAA AAATGGCTAT GGCCAGTACC TGAAAAACAT TCTTACGGAT CAAGTCGCAT GGCCATCCAA GTAA
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Protein sequence | MARKGIILAG GSGTRLYPIT HAVSKQLLPV YDKPMIYYPL STLMVADIRD VLIISTPQDT PRFEAMLGDG SQWGMNIRYA VQPSPDGLAQ AFVIGREFVG RDPSTLILGD NIFYGHDLAK QLDRASARQA GATVFAYHVH DPERYGVVEF DGEFRALSIE EKPAKPRSNY AVTGLYFYDN QVCDIAADIK PSARGELEIT DVNSRYLAAG LLDVEIMGRG YAWLDTGTHD SLIEAATFIA TLQKRQGLVV ACPEEIAYRR QWIDAEQLLK LAQPLSKNGY GQYLKNILTD QVAWPSK
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