Gene BURPS1106A_3140 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBURPS1106A_3140 
SymbolrfbA 
ID4901453 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia pseudomallei 1106a 
KingdomBacteria 
Replicon accessionNC_009076 
Strand
Start bp3062013 
End bp3062906 
Gene Length894 bp 
Protein Length297 aa 
Translation table11 
GC content63% 
IMG OID640136366 
Productglucose-1-phosphate thymidylyltransferase 
Protein accessionYP_001067378 
Protein GI126451933 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1209] dTDP-glucose pyrophosphorylase 
TIGRFAM ID[TIGR01207] glucose-1-phosphate thymidylyltransferase, short form 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGCGCA AGGGCATTAT TCTGGCCGGC GGTTCCGGCA CGCGGCTGTA TCCGATCACG 
CATGCGGTGT CGAAGCAGCT GTTGCCGGTC TACGACAAGC CGATGATCTA TTACCCGCTG
TCGACGCTGA TGGTGGCGGA CATTCGCGAT GTGCTGATCA TCTCGACGCC GCAGGACACG
CCGCGCTTCG AGGCGATGCT GGGTGACGGC AGCCAGTGGG GGATGAACAT CCGCTACGCG
GTGCAGCCGT CGCCGGACGG GCTCGCGCAG GCGTTCGTGA TCGGCCGGGA ATTCGTCGGC
CGCGATCCGT CGACGCTGAT TCTCGGCGAC AACATCTTCT ATGGCCACGA TCTCGCGAAG
CAACTCGATC GGGCATCGGC GCGGCAGGCG GGTGCGACGG TGTTCGCATA CCACGTGCAC
GATCCGGAGC GCTACGGCGT CGTCGAGTTC GACGGCGAAT TCCGCGCGCT GTCGATCGAG
GAGAAGCCCG CGAAGCCGCG CTCGAACTAC GCGGTGACGG GGCTGTACTT CTACGACAAC
CAGGTGTGCG ACATCGCGGC GGACATCAAG CCGTCCGCGC GCGGCGAGCT GGAGATCACG
GACGTGAATT CCCGCTATCT CGCCGCGGGT TTGCTCGACG TCGAGATCAT GGGCCGCGGC
TACGCGTGGC TCGATACCGG CACGCACGAT TCGCTGATCG AGGCGGCGAC GTTCATCGCG
ACGCTGCAAA AGCGCCAGGG GCTCGTCGTC GCGTGTCCGG AGGAGATCGC GTATCGGCGG
CAGTGGATCG ACGCGGAACA ACTGCTCAAG CTCGCACAGC CTTTGTCGAA AAATGGCTAT
GGCCAGTACC TGAAAAACAT TCTTACGGAT CAAGTCGCAT GGCCATCCAA GTAA
 
Protein sequence
MARKGIILAG GSGTRLYPIT HAVSKQLLPV YDKPMIYYPL STLMVADIRD VLIISTPQDT 
PRFEAMLGDG SQWGMNIRYA VQPSPDGLAQ AFVIGREFVG RDPSTLILGD NIFYGHDLAK
QLDRASARQA GATVFAYHVH DPERYGVVEF DGEFRALSIE EKPAKPRSNY AVTGLYFYDN
QVCDIAADIK PSARGELEIT DVNSRYLAAG LLDVEIMGRG YAWLDTGTHD SLIEAATFIA
TLQKRQGLVV ACPEEIAYRR QWIDAEQLLK LAQPLSKNGY GQYLKNILTD QVAWPSK