| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_3056 |
|---|
| Symbol | |
|---|
| ID | 4901106 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 1106a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009076 |
|---|
| Strand | + |
|---|
| Start bp | 2986650 |
|---|
| End bp | 2987612 |
|---|
| Gene Length | 963 bp |
|---|
| Protein Length | 320 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640136282 |
|---|
| Product | polar amino acid ABC transporter periplasmic amino acid-binding protein |
|---|
| Protein accession | YP_001067295 |
|---|
| Protein GI | 126453748 |
|---|
| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.114315 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGGCGAAAT TAAGCTTGCC GTCACGCGAT ACGCATTTGC AGCGTGTCGA ACGGCGCGCT
CGCCGCGCGC CTGCCGATCA TGCGGCAGAC GCGGCGAGCG CGGCGGACAT GACGAAGCGG
CCTCGAAATC GCCCGCTCGG TTTTCCCCCA CGGAGATCAA AGATGAAGGC ATTCAAACCG
ATGTTCACGT CAGCACTCGT CGCCGCGCTG CTCGGCGTCG CGGCCGCGTC CGCGCACGCG
GCCGACCTGC TCGACAGCGT CAAGCAGGCC GGCGTGCTGA AGATCGCGCT CGAAGGCACC
TACCCTCCGT TCGACTACCG CAACGGCGAC GGCCAGCTCG AAGGCTTCGA CGTCGACGTC
GCGAAGGAAG TCGCCGCCCG GCTCGGCGTG AAGCCGCAAT TCGTCACGAC CGAGTGGAGC
GGAATTCTCG CGGGCCTGCA GGCGGGCAAG TTCGACGTGA TCGTCAACCA GGTCGGCATC
ACGCCCGCGC GCCGGCAGGC GCTCGACTTC AGCCAGCCGT ACGTGTACTC GGCCGCGCAG
CTGATCCAGC GCGCCGACGA CAAGCACGAC TACGGCGCGC CGGGCGCGCT GCAGGGCAAG
CGCATCGGCG TCACGCTCGG CACCAACTTC GCCGATCTCG CGAAGACGCT GCAGGGCGTC
GACGTGAAGA CCTATCCGGG CGCGCCGGAG AAACTGCGCG ACGTCGCCGC TGGCCGCATC
GACGTCAGCA TGGACGACCG GCTGATGCTG CCGTACCTGA TCAAGAACGC GCACATGCCG
CTGCGGCCCG GCGCGACGAT CAACGGCGGC GAGACGCAGA TGGGCATCCC GTTCCGCAAG
GGCAACCCGA AGTTCGCGAA GGCGCTCGAC GACGCGCTCG CGTCGATGCG CGCGGACGGC
ACGCTCAAGA AGATCTCGGT GCACTGGTTC GGCGTCGACA CGTCGGTCCC GAGCGCGCAG
TAA
|
|---|
| Protein sequence | MAKLSLPSRD THLQRVERRA RRAPADHAAD AASAADMTKR PRNRPLGFPP RRSKMKAFKP
MFTSALVAAL LGVAAASAHA ADLLDSVKQA GVLKIALEGT YPPFDYRNGD GQLEGFDVDV
AKEVAARLGV KPQFVTTEWS GILAGLQAGK FDVIVNQVGI TPARRQALDF SQPYVYSAAQ
LIQRADDKHD YGAPGALQGK RIGVTLGTNF ADLAKTLQGV DVKTYPGAPE KLRDVAAGRI
DVSMDDRLML PYLIKNAHMP LRPGATINGG ETQMGIPFRK GNPKFAKALD DALASMRADG
TLKKISVHWF GVDTSVPSAQ
|
|---|
| |