Gene BURPS1106A_3019 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBURPS1106A_3019 
Symbol 
ID4902589 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia pseudomallei 1106a 
KingdomBacteria 
Replicon accessionNC_009076 
Strand
Start bp2954311 
End bp2955528 
Gene Length1218 bp 
Protein Length405 aa 
Translation table11 
GC content68% 
IMG OID640136245 
Productcoproporphyrinogen III oxidase 
Protein accessionYP_001067260 
Protein GI126453675 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0635] Coproporphyrinogen III oxidase and related Fe-S oxidoreductases 
TIGRFAM ID[TIGR00539] putative oxygen-independent coproporphyrinogen III oxidase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.18574 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGACG CGGCAACCAA CGGCGCGCGC GTCGTCGCGA CATTCGCCGC GCCCGGCCGG 
ATCCGGCTCG CGTCGCTGCC GCCGCTCGCG CTGTACGTGC ACTTCCCGTG GTGCGTGCGC
AAGTGCCCGT ACTGCGACTT CAATTCGCAC GAATGGAAGG ACGGCGGCGC GCTGCCCGAG
CGCGACTATC TGGACGCGCT GCGCGCCGAT CTCGAGCACG CGCTGCCGCT CGTCTGGGGA
CGCCAGGTAC ACACGGTGTT CATCGGCGGC GGCACGCCGA GCCTGCTGTC GGCGGCGGGG
CTCGACCGGC TGCTGTCCGA CGTGCGCGCG CTGCTGCCGC TCGACGCGGA CGCCGAGATC
ACGCTCGAGG CGAACCCCGG CACGTTCGAG GCGGCGAAGT TCGCGCAATT CCGCGCGAGC
GGCGTCAATC GCCTGTCGAT CGGCATCCAG AGCTTCAACG AAGCGCATCT GAAGGCGCTC
GGGCGGATTC ACGACGCCGC GCAGGCGCGC GCCGCGGTCG AGATCGCCGC GCGCACGTTC
GAGAACTTCA ATCTCGACCT GATGTTCGCG CTGCCGAACC AGACGCTCGA CGAATGCCGC
GCGGATCTCG AAACCGCGCT CGCGTTCGCG CCGCCGCATC TGTCGCTTTA TCATCTGACG
CTCGAGCCGA ATACGTATTT CGCGAAGTTC CCGCCCACCG TGCCGGACGA CGACGCGTCG
GCCGACATGC AGGACTGGCT GCACGAACGC ACCGCGCAGG CGGGTTACGC GCGCTACGAG
GTGTCCGCTT ATACGAAGCC GCATCGGCAG AGCAAGCACA ACCTCAACTA CTGGCGCTTC
GGCGACTATC TGGGAATCGG CGCGGGCGCG CACACGAAGC TGTCGTTTCC GAACCGGATC
CTGCGCCAGG CACGCTACAA GCATCCGGCG ACGTTCATCG AACAGGCGAA AGCGGGTACT
CCCGTGCAGG AAGAGCGGGA GGTGGGGCCG CGCGATCTGC CGTTCGAGTT CATGCTGAAC
GCGCTGCGGC TTGTCGACGG CGTGCCCGCA TACAGCTTCG AGGCGCGCAC CGGCATGTCG
CTCGCCGCGA TCGGTCCTGC GCTCGCGCAA GCCGAGCAGC GCGGCCTCCT CGTGCACGAT
CACACGCGCA TCGCGCCGAC GCCGCTCGGC CAGCGCTTCC TCAACGATCT GCAGGCGCTG
TTCCTGCGCG ACGCATGA
 
Protein sequence
MSDAATNGAR VVATFAAPGR IRLASLPPLA LYVHFPWCVR KCPYCDFNSH EWKDGGALPE 
RDYLDALRAD LEHALPLVWG RQVHTVFIGG GTPSLLSAAG LDRLLSDVRA LLPLDADAEI
TLEANPGTFE AAKFAQFRAS GVNRLSIGIQ SFNEAHLKAL GRIHDAAQAR AAVEIAARTF
ENFNLDLMFA LPNQTLDECR ADLETALAFA PPHLSLYHLT LEPNTYFAKF PPTVPDDDAS
ADMQDWLHER TAQAGYARYE VSAYTKPHRQ SKHNLNYWRF GDYLGIGAGA HTKLSFPNRI
LRQARYKHPA TFIEQAKAGT PVQEEREVGP RDLPFEFMLN ALRLVDGVPA YSFEARTGMS
LAAIGPALAQ AEQRGLLVHD HTRIAPTPLG QRFLNDLQAL FLRDA