Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1106A_3019 |
Symbol | |
ID | 4902589 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1106a |
Kingdom | Bacteria |
Replicon accession | NC_009076 |
Strand | + |
Start bp | 2954311 |
End bp | 2955528 |
Gene Length | 1218 bp |
Protein Length | 405 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640136245 |
Product | coproporphyrinogen III oxidase |
Protein accession | YP_001067260 |
Protein GI | 126453675 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0635] Coproporphyrinogen III oxidase and related Fe-S oxidoreductases |
TIGRFAM ID | [TIGR00539] putative oxygen-independent coproporphyrinogen III oxidase |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.18574 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCGACG CGGCAACCAA CGGCGCGCGC GTCGTCGCGA CATTCGCCGC GCCCGGCCGG ATCCGGCTCG CGTCGCTGCC GCCGCTCGCG CTGTACGTGC ACTTCCCGTG GTGCGTGCGC AAGTGCCCGT ACTGCGACTT CAATTCGCAC GAATGGAAGG ACGGCGGCGC GCTGCCCGAG CGCGACTATC TGGACGCGCT GCGCGCCGAT CTCGAGCACG CGCTGCCGCT CGTCTGGGGA CGCCAGGTAC ACACGGTGTT CATCGGCGGC GGCACGCCGA GCCTGCTGTC GGCGGCGGGG CTCGACCGGC TGCTGTCCGA CGTGCGCGCG CTGCTGCCGC TCGACGCGGA CGCCGAGATC ACGCTCGAGG CGAACCCCGG CACGTTCGAG GCGGCGAAGT TCGCGCAATT CCGCGCGAGC GGCGTCAATC GCCTGTCGAT CGGCATCCAG AGCTTCAACG AAGCGCATCT GAAGGCGCTC GGGCGGATTC ACGACGCCGC GCAGGCGCGC GCCGCGGTCG AGATCGCCGC GCGCACGTTC GAGAACTTCA ATCTCGACCT GATGTTCGCG CTGCCGAACC AGACGCTCGA CGAATGCCGC GCGGATCTCG AAACCGCGCT CGCGTTCGCG CCGCCGCATC TGTCGCTTTA TCATCTGACG CTCGAGCCGA ATACGTATTT CGCGAAGTTC CCGCCCACCG TGCCGGACGA CGACGCGTCG GCCGACATGC AGGACTGGCT GCACGAACGC ACCGCGCAGG CGGGTTACGC GCGCTACGAG GTGTCCGCTT ATACGAAGCC GCATCGGCAG AGCAAGCACA ACCTCAACTA CTGGCGCTTC GGCGACTATC TGGGAATCGG CGCGGGCGCG CACACGAAGC TGTCGTTTCC GAACCGGATC CTGCGCCAGG CACGCTACAA GCATCCGGCG ACGTTCATCG AACAGGCGAA AGCGGGTACT CCCGTGCAGG AAGAGCGGGA GGTGGGGCCG CGCGATCTGC CGTTCGAGTT CATGCTGAAC GCGCTGCGGC TTGTCGACGG CGTGCCCGCA TACAGCTTCG AGGCGCGCAC CGGCATGTCG CTCGCCGCGA TCGGTCCTGC GCTCGCGCAA GCCGAGCAGC GCGGCCTCCT CGTGCACGAT CACACGCGCA TCGCGCCGAC GCCGCTCGGC CAGCGCTTCC TCAACGATCT GCAGGCGCTG TTCCTGCGCG ACGCATGA
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Protein sequence | MSDAATNGAR VVATFAAPGR IRLASLPPLA LYVHFPWCVR KCPYCDFNSH EWKDGGALPE RDYLDALRAD LEHALPLVWG RQVHTVFIGG GTPSLLSAAG LDRLLSDVRA LLPLDADAEI TLEANPGTFE AAKFAQFRAS GVNRLSIGIQ SFNEAHLKAL GRIHDAAQAR AAVEIAARTF ENFNLDLMFA LPNQTLDECR ADLETALAFA PPHLSLYHLT LEPNTYFAKF PPTVPDDDAS ADMQDWLHER TAQAGYARYE VSAYTKPHRQ SKHNLNYWRF GDYLGIGAGA HTKLSFPNRI LRQARYKHPA TFIEQAKAGT PVQEEREVGP RDLPFEFMLN ALRLVDGVPA YSFEARTGMS LAAIGPALAQ AEQRGLLVHD HTRIAPTPLG QRFLNDLQAL FLRDA
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