| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_2953 |
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| Symbol | |
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| ID | 4899360 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1106a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009076 |
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| Strand | + |
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| Start bp | 2898033 |
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| End bp | 2898707 |
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| Gene Length | 675 bp |
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| Protein Length | 224 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640136179 |
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| Product | ompA family protein |
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| Protein accession | YP_001067198 |
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| Protein GI | 126452054 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.548763 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATAAAC TTTCAAAGCT CGCGTTCATT GCAGCTACCG CAGTTATGGC TGCATCCGCT
TCGGCACAGT CGGTGCCGGC GTCGCGACAA GCCGTGAATG ACAACTGGGT GAATGGCACG
GGCGAATGGG TGTGGATGAA CGGCACGAAC GAGCTCTGCT GGCGCGATGC GTTCTGGACG
CCGGCCACCG CCAACGCCAA GTGCGATGGC GCACTGGTCG CCCAGGCACC GGCACCGGCG
CCGGTCGCAC CGGTTGCTCC GGCCATCACG AGCCAGAAGA TTACGTACCA AGCCGATACG
CTGTTCGACT TCGACAAGGC CGTCCTGAAG CCGGCCGGCA AGCAGAAGCT TGACGAACTG
GCCGCGAAGA TCCAGGGCAT GAACGTCGAA GTGGTCGTGG CCACGGGCTA CACGGACCGC
ATCGGTTCGG ACAAGTACAA CGACCGTCTG TCGCTGCGCC GCGCGCAAGC CGTCAAGTCG
TACCTCGTCA GCAAGGGTGT CCCGGCGAAC AAGGTCTACA CGGAAGGCAA GGGCAAGCGC
AACCCGGTCA CGGGCAACAC CTGCAAGCAG AAGAACCGCA AGCAGCTCAT CGCCTGCCTC
GCACCGGACC GCCGCGTGGA AGTCGAAGTG GTCGGCACGC AGGAAGTGCA GAAGACGACC
GTTCCGGCGC AGTAA
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| Protein sequence | MNKLSKLAFI AATAVMAASA SAQSVPASRQ AVNDNWVNGT GEWVWMNGTN ELCWRDAFWT
PATANAKCDG ALVAQAPAPA PVAPVAPAIT SQKITYQADT LFDFDKAVLK PAGKQKLDEL
AAKIQGMNVE VVVATGYTDR IGSDKYNDRL SLRRAQAVKS YLVSKGVPAN KVYTEGKGKR
NPVTGNTCKQ KNRKQLIACL APDRRVEVEV VGTQEVQKTT VPAQ
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