| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_2838 |
|---|
| Symbol | recO |
|---|
| ID | 4902419 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 1106a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009076 |
|---|
| Strand | - |
|---|
| Start bp | 2792333 |
|---|
| End bp | 2793160 |
|---|
| Gene Length | 828 bp |
|---|
| Protein Length | 275 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640136064 |
|---|
| Product | DNA repair protein RecO |
|---|
| Protein accession | YP_001067085 |
|---|
| Protein GI | 126452734 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1381] Recombinational DNA repair protein (RecF pathway) |
|---|
| TIGRFAM ID | [TIGR00613] DNA repair protein RecO |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCGACG AGGCCGACGC CGACCCGCAA CCCTTCGCCG CGCCGCCCGC AACCGGCGCG
CCGGCTGCCG ACAAGCCGGC GCGCAAGCCG CGCCGCGCCG CGCCGCGCAC GTCCGAATTC
CGGATCGCCG AGCAGCCGGC GTTCGTGCTG CACAGCTATC CGTACCGGGA GACGAGCCTC
GTCATCGACG TGCTCACGCG CGACCACGGC CGCATCGCGC TCGTCGCGAA GGGCGCGAAG
CGCCCGCATT CGGCGCTGCG CGGCGTGCTG CAGACGTTCC AGCCGCTGTC GCTGTCGTGG
TCGGGCAAAT CGGAGCTGCG CACGCTGACG GGCGCCGAAT GGGTGGGCGG CATGCTGCCG
CTCGCGGGCG ACGCGCTGTT GTGCGGCTTC TACGCGAACG AGCTGCTCGT CAAGTTCTGT
GCGCGCGAAG ATCCGCATCC GCCGCTCTTT CAGCACTACC TCGTCACGCT CACGCGCCTG
GCGCACGGCG AGCCGCCCGT GCAGGTGCTG CGCTCGTTCG AGCGCGTGCT GCTGCGCGAG
ACGGGCTATG CGATGACGCT CAAGCGCACC GTCGCGCGGC GCGCGGTCGA GCCCGACAAG
CTCTATGTGT TCGATCCGCA GCGCGGCGTG CGCGACGCGG GCAGCGACGC GCCGTCGCAC
TGGCCCGTGA TCGCCGGCCA GACGTTGCTC GACATGGAAG AGGACGATTA CCATCGGGCG
CAGACCGTTG CGCAAAGCAA GACGCTGATG CGCTTTCTGC TCAACACCTA TCTGGGCGGC
ACGCCGCTCG CCACGCGTCA GATCCTGATC GACCTGCAAA ACCTATGA
|
|---|
| Protein sequence | MTDEADADPQ PFAAPPATGA PAADKPARKP RRAAPRTSEF RIAEQPAFVL HSYPYRETSL
VIDVLTRDHG RIALVAKGAK RPHSALRGVL QTFQPLSLSW SGKSELRTLT GAEWVGGMLP
LAGDALLCGF YANELLVKFC AREDPHPPLF QHYLVTLTRL AHGEPPVQVL RSFERVLLRE
TGYAMTLKRT VARRAVEPDK LYVFDPQRGV RDAGSDAPSH WPVIAGQTLL DMEEDDYHRA
QTVAQSKTLM RFLLNTYLGG TPLATRQILI DLQNL
|
|---|
| |