Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1106A_2335 |
Symbol | |
ID | 4900827 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1106a |
Kingdom | Bacteria |
Replicon accession | NC_009076 |
Strand | - |
Start bp | 2309661 |
End bp | 2311301 |
Gene Length | 1641 bp |
Protein Length | 546 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640135564 |
Product | long-chain-fatty-acid--CoA ligase |
Protein accession | YP_001066599 |
Protein GI | 126451552 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGGTAAGC CGTTGCTGGG CCAGATGATG GATATGCCGC TGCTCGTGTC GTCGCTGATC GCGCATGCGG CGCGACACGC GGGTGACGTC GAGATCGTGT CCCGGCGCGT CGAGGGCGAC ATTCACCGCT ATACCTATCG CGATTGCGAA GCGCGTTCCA AACGGCTCGC GCAGGCGCTG ACCGGCCTGG GCGTGGGCGT GGGCGAGCGC ATTGGAACGC TCGCGTGGAA CGGCTACCGG CACGTCGAGG CGTATTACGG CATCAGCGGG ATGGGCGCCG TCTGCCATAC GATCAACCCG CGCCTCTTTC CCGAGCAGAT CGCGTACATC GTCAACCACG CCGAGGATCG ATACGTGCTG TTCGACCTCA CCTTCGCGCC GCTCGTCGAT CAGCTCGCGC CGCAATGCCC GAATGTGAAG GGCTGGATCG CGATGACGGA CGACGCGCAT CTGCCGAAGG GCGCGACGCC TTATCTCTGT TACGAGACGC TCGTCGGCGC GCAGGACGGC GATTACGCCT GGCCGCTGCT CGACGAGCGG CAGGCGTCGT CGCTCTGCTA CACGTCCGGC ACGACGGGCC ACCCGAAGGG CGCGCTCTAT TCGCACCGCT CGACGGTGCT GCACGCGTAC GGCGCGGCGC TGCCCGACGC GATGGGGCTG TCCTCGCGCG ACGCGGCGCT GCCCGTCGTG CCGATGTTCC ACGTCAACGC ATGGGGGCTG CCGTACACGG CGGCGCTCAC CGGCACGAAG CTCGTGCTGC CCGGCAAGGA CCTCGACGGC AAATCGCTGT ACGAGCTGAT CGAAAGCGAG CGCGTGACGT TCTCGGCGGG CGTGCCCACC GTCTGGCTCG GTCTGCTCGC GTACATGCGC GAGGCCGGCG TGCGCTTCTC GACGCTCGAG CGCACGGTGA TCGGCGGCTC CGCGTGCCCG CCTTCGATGC TCGAGACGTT CGAGGACGTC TACGACGTGC GTGTGATCCA TGCATGGGGG ATGACCGAGC TGTCGCCGCT CGGCACGCTG GCCAAGCTCA ATTGGGCGCA GTCGCAGCGC GGCATCGGCG AGCAGCGGCG GCTCCTCGAG AAGCAGGGCC GGGTGATCTA CGGGATCGAC ATGCGCATCG TCGGCGAGGA CGGCCGCGAG CTGCCGTGGG ACGGCGTCGC GTTCGGCGAC TTGCAGGTGC GCGGGCCGTG GGTGATCGAC CGCTATTTCG GAATCGACGC GTCGCCGCTC GTCGACGGCT GGTTCCCGAC GGGCGACGTC GCGACGATCG ACGCCGACGG CTTCCTGCAG ATCACCGATC GCAGCAAGGA CGTGATCAAG TCGGGCGGCG AATGGATCAG CTCGATCGAC GTCGAGAACG TCGCGGTGGC GCACCCGGCC GTCGCGGAGG CCGCGTGCAT CGCATGCGCG CATCCGAAAT GGACCGAGCG GCCGCTCCTC GTCGTTGTCA AGCGCGCCGG CATGGACGTG ACGCGCGACG AACTGCTCGC GTTCTACGAG GGCAAGGTCG CGAAATGGTG GATTCCGGAC GATGTCGCGT TCGTCGACGC GCTGCCGCAC ACCGCGACGG GCAAGCTGCA AAAGCTCAAG CTGCGCGAGC AATTCCGGGG CCACGTGCTG CCGACGGCCG TGGACGCGTA G
|
Protein sequence | MGKPLLGQMM DMPLLVSSLI AHAARHAGDV EIVSRRVEGD IHRYTYRDCE ARSKRLAQAL TGLGVGVGER IGTLAWNGYR HVEAYYGISG MGAVCHTINP RLFPEQIAYI VNHAEDRYVL FDLTFAPLVD QLAPQCPNVK GWIAMTDDAH LPKGATPYLC YETLVGAQDG DYAWPLLDER QASSLCYTSG TTGHPKGALY SHRSTVLHAY GAALPDAMGL SSRDAALPVV PMFHVNAWGL PYTAALTGTK LVLPGKDLDG KSLYELIESE RVTFSAGVPT VWLGLLAYMR EAGVRFSTLE RTVIGGSACP PSMLETFEDV YDVRVIHAWG MTELSPLGTL AKLNWAQSQR GIGEQRRLLE KQGRVIYGID MRIVGEDGRE LPWDGVAFGD LQVRGPWVID RYFGIDASPL VDGWFPTGDV ATIDADGFLQ ITDRSKDVIK SGGEWISSID VENVAVAHPA VAEAACIACA HPKWTERPLL VVVKRAGMDV TRDELLAFYE GKVAKWWIPD DVAFVDALPH TATGKLQKLK LREQFRGHVL PTAVDA
|
| |