Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1106A_1922 |
Symbol | |
ID | 4899517 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1106a |
Kingdom | Bacteria |
Replicon accession | NC_009076 |
Strand | + |
Start bp | 1877447 |
End bp | 1878466 |
Gene Length | 1020 bp |
Protein Length | 339 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 640135152 |
Product | carbohydrate ABC transporter permease |
Protein accession | YP_001066187 |
Protein GI | 126451811 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCATGACC GGACGGCCGC GCCGTCTGCC TCTTGCGCGC CCGCCGCCGC GAGCCCCGCT CGGGCCACGG GCCCCGCGCG CGCCGCGCAC GCGCTCGCCG CGCTGCGGCG CTCGACGACG TTCTACCCGC TCGTCGGGCT CGTCGCCGTG TGCGTCGCGA TGGTGTTCGC GAGCGACAGC TTCCTGAGCG CGGCGAACCT CGAGAACGTG CTGCGGCAGG TGTCGATCAA CGCGATCATC GGCGTCGGGA TGACCTGCGT GATCCTGACG GGCGGCATCG ACCTGTCGGT CGGCTCGGTG ATGGCGCTGT CCGGCACGCT CGCGGCGGGC CTTCTCGTCG CGGGCGCGAA CGGCGCGGCG GCGCTTGCCG CGGGCATCGG CGTCGGGGTC GCGCTCGGCG CGGCGAACGG CCTGTTCGTC GCGTTCGCCG GCATGCCGCC CATCATCGTC ACGCTCGCGA CGATGGGCAT CGCGCGCGGC CTCGCGCTCA TCTACACGGG CGGCTACCCG ATCGACGGGC TGCCCGACTG GGTCCGCTTC TTCGGCAGCG GCAAGGTGCT CGGCGTGCAA ATGCCCGTGC TGACGATGCT CGCGGTCTAC GCGCTCGCGT GGCTGATGCT CGAGCGCATG CCGTTCGGCC GCTACGTCTA CGCGATCGGC GGCAACGAGC ACGCGACGCG GCTCTCGGGC GTGCGCGTGT CGCGCGTGAA GCTGGCCGTC TATACGTTCG CGGGGCTCAC GTCCGCGCTC GCCGCGCTCG TGCTGACGGG CCGCCTGATG AGCGGGCAGC CGAACGCGGG GGGCGGCTTC GAGCTCGACG CGATCGCCGC CGTCGTGATG GGCGGCACGT CGATCGCGGG CGGCCGCGGC TCGATCGTCG GCACGCTTGT CGGCGCGCTG CTGCTCGGCG TGCTGAACAA CGGCCTGAAC ATGATCGGCG TGAATCCCTA CGTGCAGAAC GTGATCAAGG GCGCCATCAT CCTGCTCGCG ATCTACATCG GCCGCGAGCG CCGCACGTGA
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Protein sequence | MHDRTAAPSA SCAPAAASPA RATGPARAAH ALAALRRSTT FYPLVGLVAV CVAMVFASDS FLSAANLENV LRQVSINAII GVGMTCVILT GGIDLSVGSV MALSGTLAAG LLVAGANGAA ALAAGIGVGV ALGAANGLFV AFAGMPPIIV TLATMGIARG LALIYTGGYP IDGLPDWVRF FGSGKVLGVQ MPVLTMLAVY ALAWLMLERM PFGRYVYAIG GNEHATRLSG VRVSRVKLAV YTFAGLTSAL AALVLTGRLM SGQPNAGGGF ELDAIAAVVM GGTSIAGGRG SIVGTLVGAL LLGVLNNGLN MIGVNPYVQN VIKGAIILLA IYIGRERRT
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