| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_1878 |
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| Symbol | |
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| ID | 4899974 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1106a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009076 |
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| Strand | + |
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| Start bp | 1835273 |
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| End bp | 1836319 |
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| Gene Length | 1047 bp |
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| Protein Length | 348 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640135108 |
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| Product | ABC transporter substrate binding protein |
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| Protein accession | YP_001066143 |
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| Protein GI | 126452998 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.314195 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACACGCG CATCGTCTCT CGGCCGACGC TCGCTCTCGC TTACCGCCGC GCTGGCCGTG
CTGGTCGCGG CGCTCGCCGC CGCATCGTTG GTCGCCGCGC CCGCGGCGCG CGCCGAAGGG
CGCATTCGGG TCGCCGAGCA GTTCGGCATC GTCTACCTGC TGCTGAACGT CGCGCGCGAT
CGGCATCTGA TCGAGCAGGC GGGACGCGCC GAGGGCATCG CGATCGATGT CGACTGGGTC
AAGCTCTCGG GCGGCGCGGC GATCAACGAT GCGCTCCTGT CCGGCTCGAT CGACATCGCG
GGCGCGGGCG TCGGGCCGCT CCTGACGATC TGGGACCGCA CGCGCGGCCG GCAGAACGTG
AAGGGTGTCG CGTCGCTCGG CAATTTGCCG TATTACCTCG TCAGCAACGA TCCGCGCGTG
AAGACGATCG CCGATTTCAC CGCGCGCGAG CGCATCGCGG TGCCGGCGGT GACGGTATCG
GTGCAATCGC GCCTGCTGCA GTTCGCGGCC GCCCAGCGTT GGGGCGATCG TGCGTACGAC
CGGCTCGACA AGCTGACGCA GGCCGTCGCG CACCCGGACG CGGCGGCCGC GATCATCGCG
GGCCGCACCG AGCTCACCGC GCACTTCGGC AATCCGCCGT TCCAGGAGCA GGAACTCGCG
GCCAATCCGA ACGCGCACAT CGTGCTGAGT TCGTACGACG TGCTCGGCGG GCCGAGCTCG
GCGACGGTGC TGTACGCGAC CGAGCGATTC CGCCGCGACA ATCCGAAGAC CTACCGCGCG
TTCGTCGCCG CGCTCGGGCA GGCGGCGCGC TATGTGCAGA CGAACCCGGA GGGCGCGGTC
GACGCGTATC TGCGCGTGAA CGGCTCGAAG GCCGATCGCG CGCTGCTGCT GAAAATCGTC
AGGAATCCGC AGGTGCAGTT CAGGATCGCG CCGCAGAACA CGTTCGCGCT CGCGGCGTTC
ATGCACCGCG TCGGCGCGAT CCGCCACGAG CCGAAGACGT GGCGCGACTA TTTCTTCGAC
GATCCGGCGA CCGCGCAGGG CAGTTGA
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| Protein sequence | MTRASSLGRR SLSLTAALAV LVAALAAASL VAAPAARAEG RIRVAEQFGI VYLLLNVARD
RHLIEQAGRA EGIAIDVDWV KLSGGAAIND ALLSGSIDIA GAGVGPLLTI WDRTRGRQNV
KGVASLGNLP YYLVSNDPRV KTIADFTARE RIAVPAVTVS VQSRLLQFAA AQRWGDRAYD
RLDKLTQAVA HPDAAAAIIA GRTELTAHFG NPPFQEQELA ANPNAHIVLS SYDVLGGPSS
ATVLYATERF RRDNPKTYRA FVAALGQAAR YVQTNPEGAV DAYLRVNGSK ADRALLLKIV
RNPQVQFRIA PQNTFALAAF MHRVGAIRHE PKTWRDYFFD DPATAQGS
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