Gene BURPS1106A_1768 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBURPS1106A_1768 
Symbol 
ID4900916 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia pseudomallei 1106a 
KingdomBacteria 
Replicon accessionNC_009076 
Strand
Start bp1728910 
End bp1730391 
Gene Length1482 bp 
Protein Length493 aa 
Translation table11 
GC content70% 
IMG OID640134998 
ProductNodT family efflux transporter outer membrane lipoprotein 
Protein accessionYP_001066037 
Protein GI126452748 
COG category[M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1538] Outer membrane protein 
TIGRFAM ID[TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGTCCGCTT GCCGGACCGC CGTGGCCGTC GCGGTCGCCG CGCTCGCGCT CGCGGGATGC 
GCGAACTATT TCGGCCTCAA GAGCGACAAG GCGATCGCTC CCGCGGCGCA GTTCGAAAGC
GCGCGGAGCC TGCCCGCGCA GGGCGGCCAA TGGCCGTCGC TCGACTGGGC GAACCAGTTC
GGCGATCCGC AATTGCCGAA GCTGATCGAC GAGGCGCTCG AAGGCAATCC GACGATCGCG
CAGGCGCAGG CGCGCATCGC GAAGGCATCG TCGTACATCG AGTCGTCGCG CTCGACGCTG
CTGCCGAAGG CCGACGCGAA GTACTCGTGG ACCCGCGAGC TGTACTCGGG CAACGCCCTT
TTCCCGCCCC CGTACGGCGG CCAGTGGTAC AGCGAGAACA ACGCGCTCGC GAGCGCGTCG
TGGGAGCTCG ATCTGTGGGG CAAGAACCGC GCGCGCCTGA ATGCGGCCGT GTCGCAGGAA
AAGGCCGCCG AAGCCGACCT GCAGCAGGCG CGCGTGACGC TCGCGACGTC GGTCGCGCGC
ACGTACAACC AGCTCGCGCA ACTGTACGCG CTGCGCGACA TCGCCGGGCG CGAGATCTCG
AACCGGCAGA CGGTCGGCAA GATCACCGAC GGCCGCGTCG GCGCGGGCCT CGACACGAAC
GTCGAGCGCC AGACCGCGCG CGGCAACATC GCGACGAGCC AGTCGACGCT GTCCGATCTC
GACGGCCAGA TCACGAACGT CCGCTATCAG CTCGCCGCGC TGCTCGGCAA AGGTCCGGAC
CGCGGGCTGC AGATCGCCGC GCCCGTGCTG AGCGCGGGCG GCGCGGTCGC GCTGCCGGAG
AACCTGCCCG CCGATCTCGT GTCGCGCCGC CCGGATCTCG TCGCCGCGCG CTGGCAGGTC
GAAGCGGCGA TGCACGACGT GAAGGAAGCG AAAGCCGAGT TCTTTCCGGA CATCAACCTC
GCGGCGGGCT TCGGCTTCGA CGCGTTCGGC TGGGGCCGAT TCCTGAACTT CGCGAGCCGC
CAGGCGCAGT TCGGCCCCGC GATCCACCTG CCGATCTTCG ACGGCGGCGC GCTGCGCGCG
CAATTGAAGG GCCGCTACGC GGACTTCGAT CTGTCGGTCG CGAACTACAA CCAGACGCTC
ATCAACGCGC TGAACGACGT CGCGACGCAA GTCGCGTCGA TTCGCTCGGT CGACACGCAA
ATGGGCGACG CGCAGCGCGC GCTCGATGCG TCGACGCGCG CCTACGAGCT CGCGGTGATC
CGCTACAAGG CGGGCCTGTC GCCGCAGTTG CAGGTGCTCA ACGCGGACAG CAACCGGCTC
GCCGCCGAGC AGACGGTGAC GAACCTGAAG ATGCGCCGCC GCGACCTGCA GATCGGCCTC
GTGAAGGCGC TCGGCGGCGG CTTCGACGCG GCCGGCACAC GGCTCGCCGC GCCCGCTCCC
GCCTCGGCGC CGGCCGCGCC CGCGCAGCAC GCATCGAACT GA
 
Protein sequence
MSACRTAVAV AVAALALAGC ANYFGLKSDK AIAPAAQFES ARSLPAQGGQ WPSLDWANQF 
GDPQLPKLID EALEGNPTIA QAQARIAKAS SYIESSRSTL LPKADAKYSW TRELYSGNAL
FPPPYGGQWY SENNALASAS WELDLWGKNR ARLNAAVSQE KAAEADLQQA RVTLATSVAR
TYNQLAQLYA LRDIAGREIS NRQTVGKITD GRVGAGLDTN VERQTARGNI ATSQSTLSDL
DGQITNVRYQ LAALLGKGPD RGLQIAAPVL SAGGAVALPE NLPADLVSRR PDLVAARWQV
EAAMHDVKEA KAEFFPDINL AAGFGFDAFG WGRFLNFASR QAQFGPAIHL PIFDGGALRA
QLKGRYADFD LSVANYNQTL INALNDVATQ VASIRSVDTQ MGDAQRALDA STRAYELAVI
RYKAGLSPQL QVLNADSNRL AAEQTVTNLK MRRRDLQIGL VKALGGGFDA AGTRLAAPAP
ASAPAAPAQH ASN