Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1106A_1768 |
Symbol | |
ID | 4900916 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1106a |
Kingdom | Bacteria |
Replicon accession | NC_009076 |
Strand | - |
Start bp | 1728910 |
End bp | 1730391 |
Gene Length | 1482 bp |
Protein Length | 493 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640134998 |
Product | NodT family efflux transporter outer membrane lipoprotein |
Protein accession | YP_001066037 |
Protein GI | 126452748 |
COG category | [M] Cell wall/membrane/envelope biogenesis [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1538] Outer membrane protein |
TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGTCCGCTT GCCGGACCGC CGTGGCCGTC GCGGTCGCCG CGCTCGCGCT CGCGGGATGC GCGAACTATT TCGGCCTCAA GAGCGACAAG GCGATCGCTC CCGCGGCGCA GTTCGAAAGC GCGCGGAGCC TGCCCGCGCA GGGCGGCCAA TGGCCGTCGC TCGACTGGGC GAACCAGTTC GGCGATCCGC AATTGCCGAA GCTGATCGAC GAGGCGCTCG AAGGCAATCC GACGATCGCG CAGGCGCAGG CGCGCATCGC GAAGGCATCG TCGTACATCG AGTCGTCGCG CTCGACGCTG CTGCCGAAGG CCGACGCGAA GTACTCGTGG ACCCGCGAGC TGTACTCGGG CAACGCCCTT TTCCCGCCCC CGTACGGCGG CCAGTGGTAC AGCGAGAACA ACGCGCTCGC GAGCGCGTCG TGGGAGCTCG ATCTGTGGGG CAAGAACCGC GCGCGCCTGA ATGCGGCCGT GTCGCAGGAA AAGGCCGCCG AAGCCGACCT GCAGCAGGCG CGCGTGACGC TCGCGACGTC GGTCGCGCGC ACGTACAACC AGCTCGCGCA ACTGTACGCG CTGCGCGACA TCGCCGGGCG CGAGATCTCG AACCGGCAGA CGGTCGGCAA GATCACCGAC GGCCGCGTCG GCGCGGGCCT CGACACGAAC GTCGAGCGCC AGACCGCGCG CGGCAACATC GCGACGAGCC AGTCGACGCT GTCCGATCTC GACGGCCAGA TCACGAACGT CCGCTATCAG CTCGCCGCGC TGCTCGGCAA AGGTCCGGAC CGCGGGCTGC AGATCGCCGC GCCCGTGCTG AGCGCGGGCG GCGCGGTCGC GCTGCCGGAG AACCTGCCCG CCGATCTCGT GTCGCGCCGC CCGGATCTCG TCGCCGCGCG CTGGCAGGTC GAAGCGGCGA TGCACGACGT GAAGGAAGCG AAAGCCGAGT TCTTTCCGGA CATCAACCTC GCGGCGGGCT TCGGCTTCGA CGCGTTCGGC TGGGGCCGAT TCCTGAACTT CGCGAGCCGC CAGGCGCAGT TCGGCCCCGC GATCCACCTG CCGATCTTCG ACGGCGGCGC GCTGCGCGCG CAATTGAAGG GCCGCTACGC GGACTTCGAT CTGTCGGTCG CGAACTACAA CCAGACGCTC ATCAACGCGC TGAACGACGT CGCGACGCAA GTCGCGTCGA TTCGCTCGGT CGACACGCAA ATGGGCGACG CGCAGCGCGC GCTCGATGCG TCGACGCGCG CCTACGAGCT CGCGGTGATC CGCTACAAGG CGGGCCTGTC GCCGCAGTTG CAGGTGCTCA ACGCGGACAG CAACCGGCTC GCCGCCGAGC AGACGGTGAC GAACCTGAAG ATGCGCCGCC GCGACCTGCA GATCGGCCTC GTGAAGGCGC TCGGCGGCGG CTTCGACGCG GCCGGCACAC GGCTCGCCGC GCCCGCTCCC GCCTCGGCGC CGGCCGCGCC CGCGCAGCAC GCATCGAACT GA
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Protein sequence | MSACRTAVAV AVAALALAGC ANYFGLKSDK AIAPAAQFES ARSLPAQGGQ WPSLDWANQF GDPQLPKLID EALEGNPTIA QAQARIAKAS SYIESSRSTL LPKADAKYSW TRELYSGNAL FPPPYGGQWY SENNALASAS WELDLWGKNR ARLNAAVSQE KAAEADLQQA RVTLATSVAR TYNQLAQLYA LRDIAGREIS NRQTVGKITD GRVGAGLDTN VERQTARGNI ATSQSTLSDL DGQITNVRYQ LAALLGKGPD RGLQIAAPVL SAGGAVALPE NLPADLVSRR PDLVAARWQV EAAMHDVKEA KAEFFPDINL AAGFGFDAFG WGRFLNFASR QAQFGPAIHL PIFDGGALRA QLKGRYADFD LSVANYNQTL INALNDVATQ VASIRSVDTQ MGDAQRALDA STRAYELAVI RYKAGLSPQL QVLNADSNRL AAEQTVTNLK MRRRDLQIGL VKALGGGFDA AGTRLAAPAP ASAPAAPAQH ASN
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