| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_1759 |
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| Symbol | |
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| ID | 4901666 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1106a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009076 |
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| Strand | + |
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| Start bp | 1717398 |
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| End bp | 1719062 |
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| Gene Length | 1665 bp |
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| Protein Length | 554 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 640134989 |
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| Product | RNA pseudouridine synthase family protein |
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| Protein accession | YP_001066028 |
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| Protein GI | 126455204 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.282053 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGACTGATA TCCACGACAT CGATTCGTCC GAATCCGCGC ATGCCGTTGC GACGGCGCGC
GCCGACGACG CACCCGAGCA GTCCGCAGCG GACGCGGGCG GCGAAGACCG CCCGCGCCGC
GGTTTGCGGC GCGGGCCGCG CAGCCTGATC GCGCGCCGCC GAGCGGCCGC GAAATCGAAG
CATTCCGATG CGCCCGAAAG CGCCGACGCG GCGCCGGCGG CCGATGCCGG CGCGGGCGCC
GACGTCGCGA AAGCGCCCGC TCGCGCGCCG CGCGGCAAGG ACGCCGCAGC GAAGCCGCCG
CGCAAGACGG CGGGCAAGCG CGAAGGCGCG GCGCGGCAGG GCGCTCAGCC GAAGCGAGGC
GCGCAGCAGG CTGCCGCGGC GGTTGCGCCG TCCGCGGAGT CTGGCCAGGA CGACGTGTTC
GCCTACGTGA TTTCGCCGGC GTTCGACGCC GACAACAACG CGCCGGGCGG CGGCGTGCGC
GCGCCGATGC TGCGCCGGGG CCGCCAGACT CAGCCGAAGC GCGTGCTGTC GCCGGACGAC
GACGCGCCGA AGCTGCACAA GGTGCTCGCG GAAGCCGGCA TGGGCTCGCG CCGCGAGATG
GAAGAGCTCA TCATTGCCGG CCGGGTGTCG GTGAACGGCG AGCCGGCGCA CATCGGCCAA
CGGATCATGC CGACCGATCA GGTGCGGATC AACGGCAAGC CGGTCAAGCG CAAGCTGCCG
AGCAAGCCGC CGCGCGTGCT GCTGTATCAC AAGCCGACGG GCGAGATCGT GAGCCACGCG
GATCCGGAGG GCCGCCCGTC CGTGTTCGAT CGGCTGCCGC CGATGAAGAC CGCGAAATGG
CTCGCGGTCG GCCGCCTCGA CTTCAACACC GAAGGCCTGC TGATGCTGAC GACGTCGGGC
GATCTCGCGA ACCGCTTCAT GCATCCGCGC TATAGCGTCG AGCGCGAGTA CGCGGTGCGC
GTCGTCGGCG AGCTGTCCGA GGCGTCGCGT CAGAGGCTGC TGCACGGCGT CGAGCTCGAC
GACGGCCCGG CGAATTTCCT GCGCATTCGC GACGGCGGCG GCGAAGGCAC GAATCACTGG
TATCACGTCG CGCTTGCCGA AGGGCGCAAC CGCGAGGTGC GGCGGATGTT CGAGGCGGTC
GGCCTGATGG TGAGCCGCCT GATCCGCACG CGCCACGGCC CGATCCCGCT GCCGCGCGGG
TTGAAGCGCG GCCGCTGGGA GGAACTCGAC GAGGCGCAGG TGCGGCGCCT GATGTCGACG
GTCGGCCTGA AGGCGCCGAC CGAGGATAAG GGCGGCAAGC GCGGCGGCCC GGCCGAGCGC
CGCCAGCCCG ATCCGATGCA GACGTCGATG GGCTTCATCA ATCGCGAGCC CGTGCTGACG
ACTCACGGCC AGCTCGACCA GCCGCGGCGC GGCCGCCGCG GGCCGGCGGG CGGCGGCTTC
GGCGCGGGCC TCGGCGGCGG CTACGCCGGC CTGCCGGGCT ACGGCGGCGC GTCGCGCCAG
GGCGGCCGCG ATGTCGACGG CAACCGCGCG TCCTACGGCG GCGCGGGTGC GAACAAGCGC
GGCGCCGGCA AGGGCGGCCG CAATCCGAAC GGCAATCGCG CCGAAGGCGG GGCGCGCGGC
GGCCCGCGTA CGCCGCAGCA GCGCAATCGT TCGCGTAGCC GCTGA
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| Protein sequence | MTDIHDIDSS ESAHAVATAR ADDAPEQSAA DAGGEDRPRR GLRRGPRSLI ARRRAAAKSK
HSDAPESADA APAADAGAGA DVAKAPARAP RGKDAAAKPP RKTAGKREGA ARQGAQPKRG
AQQAAAAVAP SAESGQDDVF AYVISPAFDA DNNAPGGGVR APMLRRGRQT QPKRVLSPDD
DAPKLHKVLA EAGMGSRREM EELIIAGRVS VNGEPAHIGQ RIMPTDQVRI NGKPVKRKLP
SKPPRVLLYH KPTGEIVSHA DPEGRPSVFD RLPPMKTAKW LAVGRLDFNT EGLLMLTTSG
DLANRFMHPR YSVEREYAVR VVGELSEASR QRLLHGVELD DGPANFLRIR DGGGEGTNHW
YHVALAEGRN REVRRMFEAV GLMVSRLIRT RHGPIPLPRG LKRGRWEELD EAQVRRLMST
VGLKAPTEDK GGKRGGPAER RQPDPMQTSM GFINREPVLT THGQLDQPRR GRRGPAGGGF
GAGLGGGYAG LPGYGGASRQ GGRDVDGNRA SYGGAGANKR GAGKGGRNPN GNRAEGGARG
GPRTPQQRNR SRSR
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