Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1106A_1636 |
Symbol | |
ID | 4901295 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1106a |
Kingdom | Bacteria |
Replicon accession | NC_009076 |
Strand | + |
Start bp | 1585914 |
End bp | 1588325 |
Gene Length | 2412 bp |
Protein Length | 803 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 640134866 |
Product | fimbrial usher protein |
Protein accession | YP_001065907 |
Protein GI | 126453255 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3188] P pilus assembly protein, porin PapC |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAAGCGGT ACAACGATGA CAGAACGAGC GGACTGCCGC GGCGGCGCGC GGCGGCGTGG GCGGTGGGCA TCGCATTCGC GGCGGCGGGG CACGCGCGCG CGGGCGAGAC GGCGACGCTC GCGGACAGCT TCGGCCGCGC GCTGCCGCCC GTGGGGGGCG CGGCGGCGCA CGGCACGCTG TATCTCGAGC TCGTCGTGAA CGCGCTGTCG ACGGGGCGCA TCGTGCCGGT TCGCTATCGC GACGGCATCT ACTACGCGCG CGCGGGCGAT CTCGCGCAGG CGTCGGTGCG CACGGGCGCG CAGCCCGATG CGCTCGTCGA TCTGTCGAGG CTCGACGGCG TGCAGGTCGA ATACGAGAGC GCCGAGCAGC GGCTGAAGCT CACCGTGCCG CCCGACTGGC TGCCGCGCCA GACGCTCGGT TCGCCGCGGC TGTACGACCG CACGCCCGCG GCCGTCAGCT TCGGGCTCCT GTTCAATTAC GACGTGTATG CGAATTCGCC GACGCTCGGC ACGAGCTACA CGTCCGCATG GACCGAGCAG CGGCTGTTCG ACCGGTGGGG CACCGTGACG AACACGGGCG TCTACCGGCG CGATTACGGT GGCGGCGCCG GCGGCGTCGG GAGCAACCGC TATCTGCGCT ACGACACGTT CTGGCGCTAT TCGGACCAGG ACCGGCTGCG CACGTACACC GCGGGCGACG TGATCACGGG CGCGCTGTCG TGGTCGAGCG CCGTGCGCTT GGGGGGCGTG TCCGTCGAGC GCGATTTCAA GGTGCGGCCC GACATCGTCA CCTATCCGCT GCCGCAGTTC TCGGGCCAGG CCGCGGTGCC CACCGCGGTC GATCTGTTCA TCAACGGCAG CAAGACGACG ACGGGGCAGG TGAATCCCGG CCCGTTCACG ATGAACAACG TGCCGTTCAT CAACGGCGCC GGCGAGGCGA CCGTCGTCAC GACCGACGCG CTCGGCCGTC AGGTGGCGAC GACGATTCCG TTCTACGTCG CGAACACGCT GCTGCAAAAA GGGCTCTCCG ATTATTCGCT GTCGGCGGGC GCGATGCGGC GCGACTACGG GATCCGCTCG TTCTCGTACG GCAAGTTCGC GGCGTCGGGC ACCGCGCGTC ACGGCCTGAC CGATTACCTG ACGCTCGAGG GCCACGTGGA GGGCGGCGAG CGCTTCGCGC TCGGCGGGCT CGGGTTCGAC CTCGGCATCG GCATGTTCGG CGTGCTCGGC GTCGCGGCGA CGCAGAGCCG CCTCGCCGGT GCGTCGGGCC GGCAATACGC GTTCGGCTAC AGCTACGCGT CGCAGCGGTT CAGCGTGTCG CTGCAGCGCA TCCAGCGCAC GAACGGGTTT CGCGACCTGT CGGTGTACGA CCTGCCGGCG AACGTCGCGT ACCGGCTCGT GCGCAGCAGC ACGCAGGCGA CGGGCGCGCT CAATCTCGGC GCGCTCGGCG GCACGCTCGG CGCTGGCTAC TTCGATGTGC GCGGCGCGGA CGGCGCGCGC ACGCGGATCG CGAACCTGTC GTATACGCGG CCGCTATGGC GGCGCGCGAC GCTCTACGCA TCGGTCAACA AGACGGTCGG CGAGCACGGC GTGGCCGCGC AACTTCAACT GATCGTGCCG CTCGGCGAGC CGGGCGTCGT GACGGGCGCG CTCGCGCGCG ACGCGAACAA CAGTTTCAGC GAGCGCGTGC AGTACAGCCG CAGCGTGCCG AGCGACGGCG GCCTCGGCTG GAATCTCGCG TACGCGGGCG GCGGCTCGCA TTATCAGCAG GCGGATGCGA CGTGGCGCAA CCGCTACTTC CAGGCGCAGG GCGGCGTGTA CGGCTACGGC GCGGGGCGCG GCTACGCGCG CTGGGGCGAG GTGCAGGGCT CGGTCGTCGT GATGGACGGC GCGGTGCTGC CCGCGAACCG TGTCGACGAT GCGTTCGTGC TGATCGATAC GCAGGGCCGC GGGGGCGTGC CGGTGCGCTA CGAGAATCAG CTCGTCGGCA AGACCGACGG CGGCGGCCAC CTGCTCGTGC CGTGGGCGCC GTCGTATTAC GCGGGCAAGT ACGAGATCGA TCCGCTCGAC CTGCCGAGCA ACGTGCGCGT GCCGATCGTC GAGCGCCGCG TCGCAGTGCG CGACCACGGC GGTGCGCTCG TCACGTTCCC GATCCGCAGG ATCGTCTGCG CGCAGATCGC GCTCGTCGAC GCGGCGGGCC GGCCGGTCGC CATCGGCTCG CGCGTGCTGC ACGAGGAGAG CGGCGAGACC GCGCTCGTCG GCTGGCAGGG CGAGACCTAT CTCGAAGGCT TGTCCGCGCT CAACCACCTG CGCGTGCGGA CGCCCGACGG CCGCACCTGC CGCGCGACGT TCGCAGCCGA CGTCGACGCG GCGCAGATGA GCCGCGTCGG CCCGCTCGCG TGCGGCGAAT AA
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Protein sequence | MKRYNDDRTS GLPRRRAAAW AVGIAFAAAG HARAGETATL ADSFGRALPP VGGAAAHGTL YLELVVNALS TGRIVPVRYR DGIYYARAGD LAQASVRTGA QPDALVDLSR LDGVQVEYES AEQRLKLTVP PDWLPRQTLG SPRLYDRTPA AVSFGLLFNY DVYANSPTLG TSYTSAWTEQ RLFDRWGTVT NTGVYRRDYG GGAGGVGSNR YLRYDTFWRY SDQDRLRTYT AGDVITGALS WSSAVRLGGV SVERDFKVRP DIVTYPLPQF SGQAAVPTAV DLFINGSKTT TGQVNPGPFT MNNVPFINGA GEATVVTTDA LGRQVATTIP FYVANTLLQK GLSDYSLSAG AMRRDYGIRS FSYGKFAASG TARHGLTDYL TLEGHVEGGE RFALGGLGFD LGIGMFGVLG VAATQSRLAG ASGRQYAFGY SYASQRFSVS LQRIQRTNGF RDLSVYDLPA NVAYRLVRSS TQATGALNLG ALGGTLGAGY FDVRGADGAR TRIANLSYTR PLWRRATLYA SVNKTVGEHG VAAQLQLIVP LGEPGVVTGA LARDANNSFS ERVQYSRSVP SDGGLGWNLA YAGGGSHYQQ ADATWRNRYF QAQGGVYGYG AGRGYARWGE VQGSVVVMDG AVLPANRVDD AFVLIDTQGR GGVPVRYENQ LVGKTDGGGH LLVPWAPSYY AGKYEIDPLD LPSNVRVPIV ERRVAVRDHG GALVTFPIRR IVCAQIALVD AAGRPVAIGS RVLHEESGET ALVGWQGETY LEGLSALNHL RVRTPDGRTC RATFAADVDA AQMSRVGPLA CGE
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