| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_1348 |
|---|
| Symbol | |
|---|
| ID | 4900598 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 1106a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009076 |
|---|
| Strand | - |
|---|
| Start bp | 1319434 |
|---|
| End bp | 1320459 |
|---|
| Gene Length | 1026 bp |
|---|
| Protein Length | 341 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640134578 |
|---|
| Product | aliphatic sulfonate ABC transporter substrate-binding protein |
|---|
| Protein accession | YP_001065621 |
|---|
| Protein GI | 126452885 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
|---|
| TIGRFAM ID | [TIGR01728] ABC transporter, substrate-binding protein, aliphatic sulfonates family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCGCTG ACGACACGCC TCGCACCGCC CTTTCCCCCT CCGCTCACGA CGATACGCGC
CGCTCGCTGC TGAAAGCAGC GGGCGCCGTC GCACTCGCCG CGCCGCTGCC CGGCGGCCTC
GCCGCGCTAT CGGCGAGCGG CGCCGCCCAC GCGCAACGCA GTGCGAAAAC ACTGCGCATC
GGTTACCAGA AGTACGGCAA CTTCGTCGTC CTGAAAGCGC GCGGCTCGCT CGAGAAGCGG
CTCGCGGATC GGCATGTGTC GGTCCAGTGG ATCGAGTTTC CGGGCGGCCC GCAATTGCTC
GAAGGCCTGA ACGCCGGCGC GATCGACGTC GGCACGGTCG GCGAAACGCC GCCCGTGTTC
GCGCTCGCGG CGGGCGTCGA TTTCGTCTAC GTCGGCAGCG AACCGCCCGC GCCATTAGGC
GAAGCCATCG TCGTGCCGCA CGATTCGCCG ATTCGCGCCG TCGCCGATCT GCGCGGCAGG
AAGATTGCGC TCAACAAGGG CTCGAACGTT CACTACCTGC TCGTGAACGC GCTGCGGCGC
GCGAAGATCG ATTACCGCGA CATCACGCCC GTCTACCTCG CGCCCGCCGA TGCACGCGCG
GCATTCGCGC AGCGCGGCGT CGACGCCTGG GTGATTTGGG ACCCTTATCT TGCGGCGATC
GAGCGTCAGA CGAACGCGCG CGCGATCGCG AATGGCGAAG GGCTCGTGAA CAACATCCAA
TACTATCTCG CGAGCCGTAC GTTCGCCGAA GCCGAGCCGC AGCTCGTGCG CGCGCTGCTC
GACGAAGTCG GCGCGGTCGA TCGTTGGGCG CGCGCGAATG TCGCCACTGT CGCCGCCCAG
CTTTCGCCGC TCGTCGGGCT CGACACGGCA ACGCTCGAAC ACGCGTTGAA GCGCGCGAGC
TATGGCGTGC AACCGATCGA CGACGCCGCG CTCGCGTATC AGCAGCGAAT CGCCGACACG
TTCACCGCCC TCAAGCTGAT TCCGCGCAGG ATCGACGTCG CCGCCGCGCG CTGGCAAGCG
GCATAG
|
|---|
| Protein sequence | MTADDTPRTA LSPSAHDDTR RSLLKAAGAV ALAAPLPGGL AALSASGAAH AQRSAKTLRI
GYQKYGNFVV LKARGSLEKR LADRHVSVQW IEFPGGPQLL EGLNAGAIDV GTVGETPPVF
ALAAGVDFVY VGSEPPAPLG EAIVVPHDSP IRAVADLRGR KIALNKGSNV HYLLVNALRR
AKIDYRDITP VYLAPADARA AFAQRGVDAW VIWDPYLAAI ERQTNARAIA NGEGLVNNIQ
YYLASRTFAE AEPQLVRALL DEVGAVDRWA RANVATVAAQ LSPLVGLDTA TLEHALKRAS
YGVQPIDDAA LAYQQRIADT FTALKLIPRR IDVAAARWQA A
|
|---|
| |