| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_1091 |
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| Symbol | |
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| ID | 4901350 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1106a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009076 |
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| Strand | - |
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| Start bp | 1073180 |
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| End bp | 1074271 |
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| Gene Length | 1092 bp |
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| Protein Length | 363 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640134321 |
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| Product | putative outer membrane porin |
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| Protein accession | YP_001065371 |
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| Protein GI | 126453231 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.432467 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGAAGA AAGTTATGCT CGCGGCGGTA CTGGCGACTG CCGGAGTGGC GGCTCACGCT
CAAAGCAGCG TGACGCTGTA CGGCCGTCTG GACGCCGGCA TCGAATACAT GAACGGCCTG
CCGAGCGCGA ACGGCGGCAG CACGAGCCGC TGGCGCGCGG AAAGCGGCAA CTGGGGCACG
AGCCTCTGGG GCTTGAAGGG CTCCGAGGAC ATCGGCGGCG GCAACAAGAT CGTGTTCCAG
TTGGAAGGCA GCTTCGACAC GATGAACGGC AACGGCCCGG GCGCCGGCAG CATCTGGAAC
CGCTGGGCAA CGATCGGCAT CTCCAACGAC ACGTACGGTA CCCTGCTGCT CGGCCGCGAG
CTCGCGATCG CGAACGGCGT GTGGGACTTC GATCCGTTCG GCCAGTCGTC GTGGTCGACG
GCTTCGCTCG TGCGCGGGCG CAACTGGAAC AAGACCAGCA ACAACATTTC GTATCAATCG
CCGAAGTTCT ACGGCTTCGA CGTCTACGGC CAATACGCGC TGTCGAACGC GACGAACTGG
AACGGCAACG GCTCGACGAG CCAGGGCCGC AGCGCGGGCC TGCAGCTCAC CTACACGACC
TCGCTGTTCC AGATCCGCGG CCTCTATGAC GAAGCGCGCG ATCCGGCGAA CGGCAAGCTC
GACGACGTGT TCAACTACTC GCGCGAATAT TTCGCTGGCG TGAACGTGTT CCTCGGCCAG
TTCAAGCTGC AGGCGGCATA CCAGGCGTCG CACGCGGACG GCGGCCCGGT CGTGAACAAC
GGCATCACGA CGACCCAGCA GGTCTGGGGC GGCGTGACGT GGCAGGCAAC GCCCGCCGCC
GCGCTGATCG CGGCCGTCTA TCACGTGAAC GCGAATCACG GCGGCGGCAA CGCGAACATC
TTCACGGTCG GCGGCTCGTA CAACCTGTCG AAGCGCACGC TGCTCGACGT GCAGGTCGCG
ACGGTGCGCA ACAGCAAGAC CGCGAACTTT GGCCTGAACG CGAACCCGGC CGGCACCGAC
ATCTCGACCG GCAATCCGAA GTTCGGCGGC AGCCAGACGG GCGTGTACGC CGGCATCCAG
CACCTGTTCT GA
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| Protein sequence | MMKKVMLAAV LATAGVAAHA QSSVTLYGRL DAGIEYMNGL PSANGGSTSR WRAESGNWGT
SLWGLKGSED IGGGNKIVFQ LEGSFDTMNG NGPGAGSIWN RWATIGISND TYGTLLLGRE
LAIANGVWDF DPFGQSSWST ASLVRGRNWN KTSNNISYQS PKFYGFDVYG QYALSNATNW
NGNGSTSQGR SAGLQLTYTT SLFQIRGLYD EARDPANGKL DDVFNYSREY FAGVNVFLGQ
FKLQAAYQAS HADGGPVVNN GITTTQQVWG GVTWQATPAA ALIAAVYHVN ANHGGGNANI
FTVGGSYNLS KRTLLDVQVA TVRNSKTANF GLNANPAGTD ISTGNPKFGG SQTGVYAGIQ
HLF
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