| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_1075 |
|---|
| Symbol | ppc |
|---|
| ID | 4900860 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 1106a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009076 |
|---|
| Strand | - |
|---|
| Start bp | 1055347 |
|---|
| End bp | 1058421 |
|---|
| Gene Length | 3075 bp |
|---|
| Protein Length | 1024 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640134305 |
|---|
| Product | phosphoenolpyruvate carboxylase |
|---|
| Protein accession | YP_001065355 |
|---|
| Protein GI | 126451534 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2352] Phosphoenolpyruvate carboxylase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCGGCATG CGCCGCCGCG CCGCCTGATC GCGCCCGCTG TTGCTGGACC GCAGTTCCCG
TTCACTCGTG CTTTCCCAAG GAAATCGATC GTGAAGTCTT CCGGATCGGC GCGCGCGACG
CGCCGCAATG CTGTCTCGTC CTCTTCCGCC CCGGCGCACG CCGAGCCCCC CGCCCGCCGC
GCCGCGAAAC CCGCACGCAA GCTCGACGGC GCCGCCGCGC GCCCGCTCGC GCCGACGAAC
GCCGCATCCG CGAAACCGCA AGGCCGCACG CGCGAAGACA AGGACCGCCC GCTCTTCGAG
GACATTCGCT ATCTCGGCCG CCTGCTCGGC GACGTCGTTC GCGAACAGGA AGGCGACGCC
GTGTTCGACG TCGTCGAGAC GATTCGCCAG ACCGCGGTCA AGTTCCGCCG CGAGGACGAC
AAGGCCGCCG CGCAGACGCT CGAGAAAATG CTGCGCAAGC TCACGCCCGA GCAGACGGTG
AGCGTCGTGC GCGCGTTCAG CTATTTCTCG CACCTCGCGA ACATCGCCGA GGACCGCCAT
CACAACCGCC GCCGCCGCAT CCACGCGCTC GCGGGCTCCG CGGCGCAGGC GGGCACCGTC
GCGTACGCGC TCGACAAGCT CAAGCAGGCG GGCGACGCGT CGTCGAAGAC GATCAAGCAG
TTCTTCGAAG GCGCGCTGAT CGTGCCCGTG CTCACCGCGC ACCCGACCGA GGTGCAGCGC
AAGAGCATTC TCGACGCGCA GCACGACATC GCGCGGCTGC TCGCCGAGCG CGACCAGCCG
CTGACCGCGC GCGAGCTCGC GCACAACGAG GCGCTGCTGC GCGCGCGCGT GACGACGCTC
TGGCAGACCC GGATGCTGCG CGACGCGCGC CTGACCGTCG CCGATGAGAT CGAGAACGCG
CTGTCGTACT ACCGCGCGAC GTTCCTCGAC GAGCTGCCCG CGCTCTACGC GGACATCGAG
GAGGCGCTCG CCGAGCACGG CCTGCGCGCG CGCGTGCCGG CGTTCTTCCA GATGGGCAGT
TGGATCGGCG GCGACCGCGA CGGCAACCCG AACGTCACCG CCGCGACGCT CGACGAGGCG
ATCAGCCGCC AGGCGGCGGT GATCTTCGAG CATTACCTCG AACAGGTGCA CAAGCTCGGC
GCGGAGCTGT CCGTGTCGAA CCTGCTCGTC GGCGCGAGCG ACGCGCTCAA GGCGCTCGCC
GCCGCGTCGC CGGACCAGTC GCCGCACCGC GTCGACGAGC CGTACCGCCG CGCGCTGATC
GGCGTCTACA CGCGGCTCGC GGCCAGCGCG CGCGTGCGGC TCGGCGAGGG CACGGTGCCC
GTGCGCAGCG CGGGCCGCGG CGCCGCGCCC GTGCGCGCGA CGCCGTACGC GGACGCGGAG
GAGTTCGCCG CCGATCTGCG CGTGCTGACC GATTCGCTCG CGCTGCATCA CGGCGAATCG
CTCGCGACGC CGCGCCTCGC GCCGCTCATG CGCGCGGCCG AGGTGTTCGG CTTCCATCTC
GCGAGCATCG ATTTGCGGCA GAGCTCGGAC ATCCATGAAG CGGTGGTCGC CGAACTGCTC
GCGCGCGGCG GCGTCGAGGC CGACTACGCG GCGCTGCCCG AAGCGGACAA GCTGCGCGTG
CTGCTCGCGG CGCTCGCGGA CCCGCGGCCG CTGCGCTCGC CGTATCTCGA CTACTCGGAC
CTCGCGAAGA GCGAGCTCGG CGTGCTCGAG CGCGCGCACG CGATCCGCGC GCAGTTCGGC
GCGCGCGCGG TGCGCAACTA CATCATTTCG CATACCGAGA CAGTGAGCGA TCTCGTCGAG
GTGCTGCTGC TGCAGAAGGA AACGGGCCTC TTCGAGGGCA CGCTCGGCAC GCCGCACGCG
AACGCGCGCA ACGGCCTGAT GGTGATTCCG CTCTTCGAGA CGATCGCCGA CCTGCGCAAC
GCGTCCGACA TCATGCGCGC GTTCTTCGCG CTGCCGGGCG TGGGCGAGCT GCTCGCGCAC
CAGGGCCACG AGCAGGAAGT GATGCTCGGC TATTCGGACA GCAACAAGGA CGGCGGCTTC
CTCACGTCGA ACTGGGAGCT CTATCGCGCG GAACTGGCGC TCGTCGATCT GTTCGACGAG
CGCGGGATCA AGCTGCGCCT GTTCCACGGC CGCGGCGGCA CGGTGGGACG CGGCGGCGGC
CCGACCTATC AGGCGATCCT GTCGCAGCCG CCCGGCACGG TAAACGGCCA GATCCGGCTC
ACCGAGCAGG GCGAGGTGAT CGCGAGCAAG TTCGCGAACC CGGAGATCGG CCGGCGCAAT
CTGGAGACGG TCGTCGCCGC GACGCTCGAG GCGACGCTCG CGCCGCACAG CAACGCGCCG
AAGCAGTTGC CCGCGTTCGA GGCGGCGATG CAGACGCTGT CGGACGCGGC GATGGCGTCG
TACCGCGCGC TCGTCTACGA GACGCCCGGC TTCACCGACT ACTTCTTCTC GTCGACGCCG
ATCACCGAGA TCGCCGAGCT GAACATCGGC AGCCGGCCCG CGTCGCGCAA GCTGCAGGAT
CCGAAGAACC GCAAGATCGA GGACCTGCGC GCGATTCCGT GGGGCTTCTC ATGGGGCCAG
TGCCGGCTGC TGCTCACCGG CTGGTACGGC TTCGGCAGCG CGGTCGCCGC GTATCTCGAC
GGCGCGCCGG ACGCGGCCGA GCGCGGCAAG CGCGTCGCGC TGCTGAAGAA AATGAACAAG
ACCTGGCCGT TCTTCGCGAA CCTGCTGTCG AACATGGACA TGGTGCTCGC GAAGACCGAT
CTCGCGGTTG CGTCGCGCTA CGCGCAGCTC GTCGCCGACA AGAAGCTGCG CAAGCACGTG
TTCGAGCGGA TCGTCGCCGA ATGGCATCGC ACGGCGGATG CGCTCGCCGA GATCACCGGC
GCGCACGCGC GGCTCGCCGC GAATCCGCTT CTCGCGCGCT CGATCAAGAA CCGCTTCCCG
TACCTCGATC CGCTGAACCA CCTGCAAGTC GAGCTGATCA AGCGGCACCG CGCGGGCGAC
ACGAACGCGC GGCTGCGGCG CGGGATCCAT CTGACGATCA ACGGGATCGC GGCCGGCCTG
CGCAATACGG GCTGA
|
|---|
| Protein sequence | MRHAPPRRLI APAVAGPQFP FTRAFPRKSI VKSSGSARAT RRNAVSSSSA PAHAEPPARR
AAKPARKLDG AAARPLAPTN AASAKPQGRT REDKDRPLFE DIRYLGRLLG DVVREQEGDA
VFDVVETIRQ TAVKFRREDD KAAAQTLEKM LRKLTPEQTV SVVRAFSYFS HLANIAEDRH
HNRRRRIHAL AGSAAQAGTV AYALDKLKQA GDASSKTIKQ FFEGALIVPV LTAHPTEVQR
KSILDAQHDI ARLLAERDQP LTARELAHNE ALLRARVTTL WQTRMLRDAR LTVADEIENA
LSYYRATFLD ELPALYADIE EALAEHGLRA RVPAFFQMGS WIGGDRDGNP NVTAATLDEA
ISRQAAVIFE HYLEQVHKLG AELSVSNLLV GASDALKALA AASPDQSPHR VDEPYRRALI
GVYTRLAASA RVRLGEGTVP VRSAGRGAAP VRATPYADAE EFAADLRVLT DSLALHHGES
LATPRLAPLM RAAEVFGFHL ASIDLRQSSD IHEAVVAELL ARGGVEADYA ALPEADKLRV
LLAALADPRP LRSPYLDYSD LAKSELGVLE RAHAIRAQFG ARAVRNYIIS HTETVSDLVE
VLLLQKETGL FEGTLGTPHA NARNGLMVIP LFETIADLRN ASDIMRAFFA LPGVGELLAH
QGHEQEVMLG YSDSNKDGGF LTSNWELYRA ELALVDLFDE RGIKLRLFHG RGGTVGRGGG
PTYQAILSQP PGTVNGQIRL TEQGEVIASK FANPEIGRRN LETVVAATLE ATLAPHSNAP
KQLPAFEAAM QTLSDAAMAS YRALVYETPG FTDYFFSSTP ITEIAELNIG SRPASRKLQD
PKNRKIEDLR AIPWGFSWGQ CRLLLTGWYG FGSAVAAYLD GAPDAAERGK RVALLKKMNK
TWPFFANLLS NMDMVLAKTD LAVASRYAQL VADKKLRKHV FERIVAEWHR TADALAEITG
AHARLAANPL LARSIKNRFP YLDPLNHLQV ELIKRHRAGD TNARLRRGIH LTINGIAAGL
RNTG
|
|---|
| |