Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1106A_0986 |
Symbol | ispH |
ID | 4902206 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1106a |
Kingdom | Bacteria |
Replicon accession | NC_009076 |
Strand | + |
Start bp | 967292 |
End bp | 968272 |
Gene Length | 981 bp |
Protein Length | 326 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640134216 |
Product | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase |
Protein accession | YP_001065267 |
Protein GI | 126454143 |
COG category | [I] Lipid transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0761] Penicillin tolerance protein |
TIGRFAM ID | [TIGR00216] (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming) |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.465492 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCTCCA CCGATACGTT GTCCGGCCAG GTTGCCGCGG CCGACGCCGA GATCCTGCTC GCCCAGCCGC GCGGCTTCTG CGCGGGTGTC GACCGCGCGA TCGAGATCGT CGAGCGTGCG ATTGCGATGC ACGGCGCGCC GATCTACGTG CGCCACGAGA TCGTGCACAA CAAGTACGTC GTCGAGGATC TGAAGAAGAA GGGCGCGATT TTTGTCGAGG AACTCGAGGA AGTGCCGTCC GGCAACACGG TGATCTTCAG CGCGCACGGC GTGTCGAAGG CGGTGCGCGA CGAGGCGGCC GTGCGCGGGC TGCGCATCTA CGATGCGACG TGCCCGCTCG TCACGAAAGT GCACGTCGAG GTCGCGAAGA TGCGCCAGGA AGGCGTCGAC ATCGTGATGA TCGGCCACAA GGGGCATCCG GAGGTCGAGG GCACGATGGG GCAGGTCGAG CGCGGCATGC ACCTCGTCGA GAGCGTCGAG GACGTGCGCC GGCTCGAGCT GCCCGATCCC GAGCGCGTCG CGCTCGTCAC GCAGACGACG CTGTCCGTCG ACGACGCGGC CGAGATCATC GGCGCGTTGA GGGCGAAGTT TCCCGCGATC CGCGAGCCGA AGAAGCAGGA CATCTGCTAC GCGACGCAGA ACCGCCAGGA CGCGGTGAAG TTCATGGCGC CGCAGTGCGA CGTCGTGATC GTCGTCGGCA GCCCGAATAG CTCGAATTCG AGCCGCCTGC GCGAGGTCGC CGAGAAGCGC GGCGTCGCCG CCTACATGGT CGACGCGCCC GAGCAGATCG ATCCGGCCTG GGTCGCCGGC AAGCGCCGGA TCGGCGTGAC CGCCGGCGCG TCCGCGCCCG AGGTGCTCGC GCAGGCCGTG ATCGCGCGCT TGCGCGAGCT CGGCGTGACC AACGTGCGGG CGCTCGAGGG CATCGAGGAG AACGTGTCGT TCCCATTGCC GCGCGGCCTG AATCTGTCTT CCGCCGGCTG A
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Protein sequence | MSSTDTLSGQ VAAADAEILL AQPRGFCAGV DRAIEIVERA IAMHGAPIYV RHEIVHNKYV VEDLKKKGAI FVEELEEVPS GNTVIFSAHG VSKAVRDEAA VRGLRIYDAT CPLVTKVHVE VAKMRQEGVD IVMIGHKGHP EVEGTMGQVE RGMHLVESVE DVRRLELPDP ERVALVTQTT LSVDDAAEII GALRAKFPAI REPKKQDICY ATQNRQDAVK FMAPQCDVVI VVGSPNSSNS SRLREVAEKR GVAAYMVDAP EQIDPAWVAG KRRIGVTAGA SAPEVLAQAV IARLRELGVT NVRALEGIEE NVSFPLPRGL NLSSAG
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