Gene BURPS1106A_0974 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBURPS1106A_0974 
Symbolsun 
ID4902726 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia pseudomallei 1106a 
KingdomBacteria 
Replicon accessionNC_009076 
Strand
Start bp956981 
End bp958243 
Gene Length1263 bp 
Protein Length420 aa 
Translation table11 
GC content71% 
IMG OID640134204 
ProductrRNA small subunit methyltransferase B 
Protein accessionYP_001065255 
Protein GI126454034 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0144] tRNA and rRNA cytosine-C5-methylases 
TIGRFAM ID[TIGR00563] ribosomal RNA small subunit methyltransferase RsmB 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGCTGC ACGGTTTCCT GATTGGCCAG ACCGAGGCGC TCCTCGCCGA AGTCCTGAAA 
TTCGCCGGCC CGGCCGACGT GACGACGAGC CGCTTCTTCC GCGCGCACCC GAAGCTCGGT
CACGCCGAGC GCGGCGTGAT CGCCGAGGCG GTGTTCGCGG TGCTGCGGCG GAGGATGGAG
TACGCGCACC TCGCCGAGAG CGGCACCGGC GCGCCGGCGC GGCGCCTGGC GCTGCTCGGG
CTGATGCAGA CGGTCGGCCG CTCGGCGCTC AAGCCGTTCG TGTCGGACGC CGAATGGGCG
TGGCTCGACC ACGTTGCGAA GATCGATCCG GCGAGCCTGC CGCTGCGCGT GCGCACGAAC
CTGCCCGACT GGATTCACCA GGCGCTCGCC GAGCGCCTGG GCGCCGACGA GCTCGCGCAG
TTCGCGGCGG CCGTCAACTA TCCGGCGCCG CTCGATCTGC GTGCGAACGC GCTGAAGGCG
ACGCGCGACC AGGTGATCGA CAGCCTGCGT GCCGCGGGCA TCGACGCCGG CGCGACGCCG
TTCGCGCCGT TCGGCGTGCG CGTGGTCGGC AAGCCGGCGC TCACGAAGCT CAAGCTGTTC
GAGGAGGGGC TGATCGAGGT GCAGGACGAG GGCAGCCAGT TGCTGTGCTC GCTCGTCGCG
CCGCGCCGCG GCGAGATGAT CGTCGATTTC TGCGCGGGCG CGGGCGGCAA GACGCTCGCG
CTCGGCGCGA TGATGCGCTC GACGGGGCGC CTCTATGCAT TCGACGTGTC CGAGAAGCGT
CTTGCGAAGC TGAAGCCGCG CTTGGCGAGA AGCGGCCTGT CGAACGTGAA CCCGGTGCTG
ATCGACAGCG AGCACGACGC GAAGATCAAG CGGCTCGCGG GCAAGATCGA CCGCGTGCTC
GTCGATGCGC CGTGCAGCGG CCTCGGCACG CTGCGCCGCA ATCCCGATCT GAAGTGGCGC
CAGTCGCGCG AGACGGTCGA TGAGCTCGCG CCGAAGCAGG CGTCGATTCT CGCGAGCGCC
GCGCGCCTCG TGAAGAAGGG CGGCCGGCTC GTGTACGCGA CCTGCAGCGT GCTCGAGGCG
GAGAACGAAG CGATCGTGTC GGCGTTCCTC GCCGCGCATC CGGCGTTCGA GCTCGTGCCG
GCGAGCCGCG TGCTCGCCGA GCAGCGGATC GCGCTCGACA CGGGCGACTA CCTGTCGCTC
TGGCCGCATC GCCACGCGAC CGACGGCTTT TTCGCCGCCG TGCTCGAGCG GCGCGCGCAG
TAA
 
Protein sequence
MKLHGFLIGQ TEALLAEVLK FAGPADVTTS RFFRAHPKLG HAERGVIAEA VFAVLRRRME 
YAHLAESGTG APARRLALLG LMQTVGRSAL KPFVSDAEWA WLDHVAKIDP ASLPLRVRTN
LPDWIHQALA ERLGADELAQ FAAAVNYPAP LDLRANALKA TRDQVIDSLR AAGIDAGATP
FAPFGVRVVG KPALTKLKLF EEGLIEVQDE GSQLLCSLVA PRRGEMIVDF CAGAGGKTLA
LGAMMRSTGR LYAFDVSEKR LAKLKPRLAR SGLSNVNPVL IDSEHDAKIK RLAGKIDRVL
VDAPCSGLGT LRRNPDLKWR QSRETVDELA PKQASILASA ARLVKKGGRL VYATCSVLEA
ENEAIVSAFL AAHPAFELVP ASRVLAEQRI ALDTGDYLSL WPHRHATDGF FAAVLERRAQ