Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1106A_0933 |
Symbol | sodB |
ID | 4902116 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1106a |
Kingdom | Bacteria |
Replicon accession | NC_009076 |
Strand | + |
Start bp | 916240 |
End bp | 916818 |
Gene Length | 579 bp |
Protein Length | 192 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640134163 |
Product | superoxide dismutase (Fe) |
Protein accession | YP_001065214 |
Protein GI | 126454128 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0605] Superoxide dismutase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.200244 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTCATA CGCTCCCGCC GCTGCCGTAC GCTGAAGACG CCCTCGCTCC GCATATCTCG CAGGAGACGA TCCAGTTTCA CTACGGCAAG CATCACCAGG CTTATGTGAC GAACCTGAAC AACCTGATCC CCGGCACCGA GTTCGAGAAC CTGCCGCTGG AAGAGATCGT GAAGAAGTCG TCGGGCGGCA TCTTCAACAA CGCCGCGCAG ATCTGGAATC ACACGTTCTT CTGGAACAGC CTGTCGCCGA ACGGCGGCGG CGCGCCGACG GGCGCGCTCG GCGACGCGAT CAACGCGAAG TGGGGTTCGT TCGACGCGTT CAAGGAGGCG TTCACGAAGG CAGCGGTCGG CACGTTCGGC TCGGGCTGGG CTTGGCTCGT GAAGAAGGCG GACGGCTCGC TCGACATCGT GTCGACGAGC AATGCGGCCA CGCCGCTCAC GACGGCCGAC AAGCCGCTCG TCACGATCGA CGTGTGGGAA CACGCTTACT ACATCGATTA CCGCAACGCG CGCCCGAAGT TCGTCGAAGC GTTCTGGAAC ATCGTGAACT GGGACTTCGC CGCGAAGAAC TTCGCGTAA
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Protein sequence | MAHTLPPLPY AEDALAPHIS QETIQFHYGK HHQAYVTNLN NLIPGTEFEN LPLEEIVKKS SGGIFNNAAQ IWNHTFFWNS LSPNGGGAPT GALGDAINAK WGSFDAFKEA FTKAAVGTFG SGWAWLVKKA DGSLDIVSTS NAATPLTTAD KPLVTIDVWE HAYYIDYRNA RPKFVEAFWN IVNWDFAAKN FA
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