Gene BURPS1106A_0708 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBURPS1106A_0708 
SymbolpdxA 
ID4901956 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia pseudomallei 1106a 
KingdomBacteria 
Replicon accessionNC_009076 
Strand
Start bp686238 
End bp687287 
Gene Length1050 bp 
Protein Length349 aa 
Translation table11 
GC content72% 
IMG OID640133938 
Product4-hydroxythreonine-4-phosphate dehydrogenase 
Protein accessionYP_001064990 
Protein GI126451816 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1995] Pyridoxal phosphate biosynthesis protein 
TIGRFAM ID[TIGR00557] 4-hydroxythreonine-4-phosphate dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCGACC GTCCGCAGCC GCTGCGCATC GCGATCACGA CCGGCGAGCC GGCCGGCGTC 
GGCCCCGAGC TGACGGCCCG CGCGCTCGCC GACGCGGCGA CGCGCTGGCC GGACGCACGC
TTCACGGTGC TCGGCGACGC GAGCCTGATC GCCGCGCGCG CGGCGGCGGT CGGCCTCGAT
TGGACGCGCA TGACGGCGGC GGGGGGCGGT GCGCATGTCG CGGACGCGCA CGTCGCCAAC
GCGCATGTCG CCAACGCGCA TGTCGCCGTC GCGCATCGCG CGCTTGCCGC GCCCGCCGAG
GCGGGCAAGC TGAATCCGGC GAACGGGCGC TACGTGCTCG ATCTGCTCGA TGCGGCGATC
GACGGCGCGC TCGCCGGCGA ATACGACGCG ATCGTCACCG CGCCGCTGCA AAAGAGCACG
ATCAACGACG CCGGCGTGCC TTTTACCGGC CACACCGAAT ATCTCGCCGA GCGCACGCGC
ACGCCGCACG TCGTGATGAT GCTCGCCGGC ACGGGCGAGC GGCCGCTGCG CGTCGCGCTC
GCGACGACGC ACCTGCCGCT CAGGGATGTG TCGGCCGCGC TGACGATCGA CGGTCTCGCC
GATACGCTGT CGATCATCGA TCGCGATCTG CGCGGCAGCT TCGGCCTTGC CGCGCCGCGC
ATCCTCGTCA CGGGGCTCAA TCCCCATGCG GGCGAGCACG GCTATCTCGG CCGCGAGGAA
ATCGACGTGA TCGAGCCGGC GCTCGAGCGC GCGCGGGCGG CGGGCATCGA CGCGCGCGGG
CCGTACCCGG CCGATACGCT GTTCCAGCCG CGTTACCTCG AGCACGCGGA TTGCGTGCTC
GCGATGTTTC ATGATCAGGG GCTGCCGGTC CTCAAGTACG CGACGTTCGG CGAAGGCATC
AACGTCACGC TCGGCCTGCC GATCATCCGC ACGTCGGTCG ATCACGGCAC CGCGCTCGAT
CTCGCCGGCA CCGGCCGGGC CGATCCGGGC AGCCTCGTCG CCGCGATCGA CACCGCCGTG
ACGATGGCGC GCCATCGGCG CGCGGGCTGA
 
Protein sequence
MSDRPQPLRI AITTGEPAGV GPELTARALA DAATRWPDAR FTVLGDASLI AARAAAVGLD 
WTRMTAAGGG AHVADAHVAN AHVANAHVAV AHRALAAPAE AGKLNPANGR YVLDLLDAAI
DGALAGEYDA IVTAPLQKST INDAGVPFTG HTEYLAERTR TPHVVMMLAG TGERPLRVAL
ATTHLPLRDV SAALTIDGLA DTLSIIDRDL RGSFGLAAPR ILVTGLNPHA GEHGYLGREE
IDVIEPALER ARAAGIDARG PYPADTLFQP RYLEHADCVL AMFHDQGLPV LKYATFGEGI
NVTLGLPIIR TSVDHGTALD LAGTGRADPG SLVAAIDTAV TMARHRRAG