Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1106A_0453 |
Symbol | |
ID | 4901273 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1106a |
Kingdom | Bacteria |
Replicon accession | NC_009076 |
Strand | + |
Start bp | 418816 |
End bp | 419454 |
Gene Length | 639 bp |
Protein Length | 212 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 640133683 |
Product | putative lipoprotein |
Protein accession | YP_001064736 |
Protein GI | 126451562 |
COG category | [R] General function prediction only |
COG ID | [COG3218] ABC-type uncharacterized transport system, auxiliary component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.605353 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCACGCAC ATTTCATGTC AGGTTCACTG TCCCGCCGCG GCCGTCCGGC GCTCGCGCTC GCCGTGGCGC TCGTGATGGC GAGCGCGAGC GGCTGCGCGG GAACGCCCGC CGCGCTCGCG AACATCCGCT ACGACCTCGG CCCGGCGCAG CCGGCCGCCT CGTCGGGCAC CGGGCCCGCG CTCAAGGTGC TCGACGTGAG CGCGCCCGAT GCGCTGAACA CCGATCGCTT CGTCTACCGG CTCGCGTACT CGGACGCGCA GCGGATCGCC GTCTACCGCG ACAGCAAATG GACGGCGCCG CCCGCGCAAC TGCTGACGCA GCGGCTGCGC GGCGCGCTGT CGGGGCGCGG CGCGGTGCTC GCGGGCGACG ACGGCGTGCG CGCGCCCGTG CTGAAGGTCG AGCTGTCCGA GTTCGAGCAG GTGTTCGACG GCCGCTCGGA GAGCCACGCG GCCGTCACCG CGCGCGCGAC GCTCACGCAG GAGGGCAAGG TGCTCGGCCA GCGCACGTTC GTGTCGCGCG CGCCGGCGAG CACGCCGGAC GCGGCGGGCG GCGCGCAGGC GCTCGCCACG GCGAGCGACG CGCTCGTCTC GCAGCTCGTC GCGTGGCTCG GCGTGCAGGC GTACGCGGCC GCGCAATGA
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Protein sequence | MHAHFMSGSL SRRGRPALAL AVALVMASAS GCAGTPAALA NIRYDLGPAQ PAASSGTGPA LKVLDVSAPD ALNTDRFVYR LAYSDAQRIA VYRDSKWTAP PAQLLTQRLR GALSGRGAVL AGDDGVRAPV LKVELSEFEQ VFDGRSESHA AVTARATLTQ EGKVLGQRTF VSRAPASTPD AAGGAQALAT ASDALVSQLV AWLGVQAYAA AQ
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