| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_0400 |
|---|
| Symbol | |
|---|
| ID | 4902524 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 1106a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009076 |
|---|
| Strand | + |
|---|
| Start bp | 365222 |
|---|
| End bp | 366616 |
|---|
| Gene Length | 1395 bp |
|---|
| Protein Length | 464 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640133630 |
|---|
| Product | cyclic diguanylate phosphodiesterase |
|---|
| Protein accession | YP_001064683 |
|---|
| Protein GI | 126452749 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2200] FOG: EAL domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGAGGCTTG TCGACAACTA CGATCGAACA ACCGAGGACC ACGATGAAAA CCCGCGAGTC
GCATGTTTCG CCTGCCGACG TTTTCGTCAT CAGGAGGGCC GCCGCATGAC CATTGCCCAG
CAGGAGCGCC CTGTCGCCGC GTCGCCGTAC CGCTTCGAGG CGGAGATGAC GTCCGGCCTC
GAGCGCGTCG CCGCGCATCA CCACGACCTC ACGCTTACGT CGGTGTTCCA GCCGATCTTC
AGCCTGTCTC ATATGCGCGC GGTCGGCTAC GAGGCGTTGC TGCGCGCGCA CGATGCGCTC
GACCGGCCCG TTTCGCCGCT CGACGTGTTC GGCGAAGCCG CGCGCCACGG CGAGGCGACA
CAGGTCGATC GCCTCGCGCA GGCGCTGCAT CTGGAGAACT TCGCGCGCTT CGGCGCCGAG
CGTGAATGGC TGTTCCTCAA CGTGCACCCC GGCGTGCTCA CCGATCCGTT TCAGGCCGCC
GCGCTGTTCG CGAACCTGAG GCGGCTCGAC ATTGCGCCGC GGCGCATCGT GCTCGAAGTG
CTCGAGCAGC GCGCCGAGGA CATCGAACGG CTCGCCGACG CGGTGCGTGA GTTCCGCGAG
CACGGCTTCC TGATCGCGCT CGACGATTTC GGCGCCGGTC ATTCGAACAT CGAACGAATC
TGGCAACTGA ACCCGGACAT CGTGAAGCTC GACCGGATCA TGCTGTCGCA CGCGCAGCAC
CGCGCGGGGC TCACGGCGAT CCTGCACGGG CTCGTCACGC TGCTGCACGA GGCGGGCAAG
CTCGTGCTGA TCGAGGGGAT CGAAACCGAG CACGAGGCGC AGATCGCGCT CGCGTGCGAC
GCGGATTTCG TGCAAGGCCA TTTCTTCGGG CGACCGGCGC CGGGGCTGCC CGACAGCGCG
GCGGCGTCCA CGTGCATCGG CGAGCTGACC GAGCGCTATC GTCAGCAGAC CGAAGCGGCC
GAGCGGCGCG ACGCACAGCG GCTCGCGCCG TACCAGCGTG CGTTCGAGCG CGCGGCGGAA
CGCCTCGCGG CGGGCGAGCC GCTCGACGAG GTCTGCTGGA ATTTCCTCGC GCTCGATCAC
GCGGCGCGCT GCTTCCTGCT CGACGAGCGC GGGCGGCAGG CGGGCCGCAA CGTCGTGCTG
CGCGCGGACC GCGCATCGCA CGAGACGCGC TTTCTGCCGC TGGCCGACGC GCAGGGCGCG
AACTGGCTGA GGCGCCCGTA TTTCCGGGCG GCGATCGCCG AGCCCGGGCG CGTGCAGGCG
ACGCGGCCGT ATCTGTCGAT CAACGAGGCG CTGCCTTGCG TGACGCTGTC GATCGCGGTG
CGCGTGAACG ATGCGCTATG CGTGCTCTGC GGCGATATCG ACTGGATCGA TGCGGACGCA
GCGGCCGGCG CGTAG
|
|---|
| Protein sequence | MRLVDNYDRT TEDHDENPRV ACFACRRFRH QEGRRMTIAQ QERPVAASPY RFEAEMTSGL
ERVAAHHHDL TLTSVFQPIF SLSHMRAVGY EALLRAHDAL DRPVSPLDVF GEAARHGEAT
QVDRLAQALH LENFARFGAE REWLFLNVHP GVLTDPFQAA ALFANLRRLD IAPRRIVLEV
LEQRAEDIER LADAVREFRE HGFLIALDDF GAGHSNIERI WQLNPDIVKL DRIMLSHAQH
RAGLTAILHG LVTLLHEAGK LVLIEGIETE HEAQIALACD ADFVQGHFFG RPAPGLPDSA
AASTCIGELT ERYRQQTEAA ERRDAQRLAP YQRAFERAAE RLAAGEPLDE VCWNFLALDH
AARCFLLDER GRQAGRNVVL RADRASHETR FLPLADAQGA NWLRRPYFRA AIAEPGRVQA
TRPYLSINEA LPCVTLSIAV RVNDALCVLC GDIDWIDADA AAGA
|
|---|
| |