| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_0355 |
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| Symbol | |
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| ID | 4902043 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1106a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009076 |
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| Strand | + |
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| Start bp | 326796 |
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| End bp | 327872 |
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| Gene Length | 1077 bp |
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| Protein Length | 358 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640133585 |
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| Product | outer membrane porin |
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| Protein accession | YP_001064638 |
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| Protein GI | 126452502 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | [TIGR03304] outer membrane insertion C-terminal signal |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.17583 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGTCAT CCTTCAGCCG CGCGCTGCAA ACCACTTTCG CGTGCGCCGC CGTGGCGGCG
CTGGCCGCCG GCGCTTCGGG CGCGCGCGCG CAATCGAGCG TTCAGCTCTA CGGGCAGGTC
GACGAATGGA TCGGCGCGCA GAAATTCCCC GGCGGGCAGC GCGCGTGGGG CGTGCAGGGC
GGCGGAATGT CGACGTCGTA CTGGGGGCTG CGCGGCACCG AGGATCTCGG CGGCGGTTAT
CAGGCGATCT TCACGCTCGA GGATTTCTTC CGCGCGCAGA ACGGCCATTA CGGCCGCTTC
GACGGCGACA CGTTCTTCGG CCGCAATGCG TATGTCGGAC TCGCGACGCC TTACGGCACG
GTGCGCGCCG GGCGCCTGAC GACGCAGCTG TTCATCTCGA CGATCCTCTT CAACCCGTTC
ATCGATTCGT ATGTGTTCTC GCCGATGGTC TACCACGTGT TCCTCGGCCT CGGCACGTTC
CCGACGTATA CGACCGATCA GGGCGTCGTC GGCGATTCGG GCTGGAACAA CGCGATCGAC
TACACGAGCC CGAGCTTCGG CGGCTTGAAC GCGGCCGCGA TGTACGCGCT CGGCAACACG
GCGGGCGACA ACCGCTCGAA GAAGTGGAGC GGCCAGCTGA ACTATTCGAG CGGCCCGTTC
GCGGCGACGG CCGTCTACCA GTACGTGAAC TTCAACGGCG GCCCGGGCGA TCTCGGCGCG
CTCGTGTCCG GCATGAAGAG CCAGGGCGTC GCGCAGCTCG GGCTGTCGTA CGACTTCAAG
CTTGCGAAGA TCTACGCGCA ATACATGTAT ACGAAGAACG AACTGAACAC GGGAAGCTGG
CACGTGAACA CCGCGCAAGG CGGCGTATCG GTGCCGCTCG GGCCGGGCAG CGCGCTCGCG
TCGTATGCGT ATTCGCGCGA TTCGGGCGGG CACGACCAGA CGCGTCGCAC GTGGGCGCTC
GGCTACGATT ATCCGCTGTC CAAGCGCACC GACGTGTATG CCGCGTACAT GAACGACCGC
TATTCGGGCA TGTCGGGCGG CGACACGTTC GGCGCGGGAA TTCGTGCGAA GTTCTAA
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| Protein sequence | MKSSFSRALQ TTFACAAVAA LAAGASGARA QSSVQLYGQV DEWIGAQKFP GGQRAWGVQG
GGMSTSYWGL RGTEDLGGGY QAIFTLEDFF RAQNGHYGRF DGDTFFGRNA YVGLATPYGT
VRAGRLTTQL FISTILFNPF IDSYVFSPMV YHVFLGLGTF PTYTTDQGVV GDSGWNNAID
YTSPSFGGLN AAAMYALGNT AGDNRSKKWS GQLNYSSGPF AATAVYQYVN FNGGPGDLGA
LVSGMKSQGV AQLGLSYDFK LAKIYAQYMY TKNELNTGSW HVNTAQGGVS VPLGPGSALA
SYAYSRDSGG HDQTRRTWAL GYDYPLSKRT DVYAAYMNDR YSGMSGGDTF GAGIRAKF
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