| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_0302 |
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| Symbol | |
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| ID | 4902646 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1106a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009076 |
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| Strand | + |
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| Start bp | 279690 |
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| End bp | 280823 |
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| Gene Length | 1134 bp |
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| Protein Length | 377 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640133532 |
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| Product | outer membrane porin |
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| Protein accession | YP_001064585 |
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| Protein GI | 126454597 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGCAAA CCACCAAAAT CACGGGACTG ATAGGAGGGG CCGTGCTGGC GATCGCAGGC
CAGCAGGCGA TGGCGCAAAG CTCGGTGACC CTCTGGGGCG TCGCGGACGT GAGCCTGCGT
TACCTGAGCA ACTCGAACGC GCAGAACGAC GGCCGCTTTT TCATGACGAA CGGCGCGATC
ACCAACAGCC GCATCGGCCT GCACGGCAGC GAAGACCTGG GCGGCGGCCT GAAGGCGATC
TTCAATCTCG AAAGCGGCGT CAATCTGCAG GACGGCGCGT TCTCGGACAG CAAGCGCATC
TTCAATCGCG CCGCCTATGT CGGCCTGACG AGCCAGTACG GCACCGTGAC GCTCGGCCGG
CAGAAGACGG TGCTGTTCGA TCTGCTGAGC GACACGTACG ATCCGCTGAC GGTCGGCAAC
TATCTGGAAA ACGCGTGGCT GCCCGTCGCG CTCGGCGCGG GCCTGTACGC GGACAACTCG
GTCAAGTATC GCGGCACGTT CGGTGGCCTG ACGATCGGCG CGATGTACTC GTTCGGCACG
GATTCGACCG CCACGGGCGC GGGCGGCTTC TCCGGCCAGC TTCCCGGCCA CATGGGCGCG
GGCAACATGT ACGGCTTCTC GCTGTCGTAC GTGGCGGGGC CCGTGAGCGT GGCGGCGGGC
GTGCAGCAGA ACAGCGACAA TTCGAACCGC AAGCAGACGA TCTATCACGC GAACGTCGTC
TACGCGTTCA GCAAGGCGAA GATCTACGCG GGCTATCTGC ATTCGAAGGA CGATACGGGC
TTCGTCGATA CGGTGCTCGC GCAGCAGCCG GGGCTCTTCA CGAGCGGCGC GCCCAAGCGC
ACCGGTCGGA TCGACGACGG CCCGTTCGCC GGCGTGAGCT GGCAGGCGAC GCCCGCGCTC
ACGCTGACGG GCGCGTTCTA CTATGACCGG ATGCGCAACG CGACGATCGC GAATGGCCAG
CTCGACAGCG GCAATCGCTA TACGGTCGTC GGCCTCGTCG AGTATGCGTT GTCGAAACGC
ACCGAGATCT ACGGCACCGT CGACTTCAAC AAGGTGAACG GGGCGGCGAC GGTCGAGATG
CCGGGCCGCA GCAACCAGAC GGGCGTCGCG ATCGGTCTGC GCAACATCTT CTGA
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| Protein sequence | MKQTTKITGL IGGAVLAIAG QQAMAQSSVT LWGVADVSLR YLSNSNAQND GRFFMTNGAI
TNSRIGLHGS EDLGGGLKAI FNLESGVNLQ DGAFSDSKRI FNRAAYVGLT SQYGTVTLGR
QKTVLFDLLS DTYDPLTVGN YLENAWLPVA LGAGLYADNS VKYRGTFGGL TIGAMYSFGT
DSTATGAGGF SGQLPGHMGA GNMYGFSLSY VAGPVSVAAG VQQNSDNSNR KQTIYHANVV
YAFSKAKIYA GYLHSKDDTG FVDTVLAQQP GLFTSGAPKR TGRIDDGPFA GVSWQATPAL
TLTGAFYYDR MRNATIANGQ LDSGNRYTVV GLVEYALSKR TEIYGTVDFN KVNGAATVEM
PGRSNQTGVA IGLRNIF
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