| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_0083 |
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| Symbol | prtR |
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| ID | 4900147 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1106a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009076 |
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| Strand | - |
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| Start bp | 77544 |
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| End bp | 78302 |
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| Gene Length | 759 bp |
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| Protein Length | 252 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 640133313 |
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| Product | transmembrane regulator PrtR |
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| Protein accession | YP_001064368 |
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| Protein GI | 126451600 |
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| COG category | [K] Transcription |
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| COG ID | [COG5662] Predicted transmembrane transcriptional regulator (anti-sigma factor) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.273948 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACATTC CGCCCGACGA ACACGATCTT CACGCCTATG TCGACGGCCG GCTCGACGCC
GATGCGCGCA CGGCCGTTAA ACGCTGGCTC GCGCTGCATC CGGCGCGCGC GGAGCAGGTG
CGGCGCTGGC GGCAAGATGC GCAGCAACTG CGCGCGGCGC TCGATTCGGT CCCGACGCCC
GCTCCGACGA GAACGCTCGA TCCCGCCGTG CTGCGCGCGC GCCGCGCCGG CCGCGCGCGT
GCGCGGCTCG CGATGGCGGC GTCGCTCGTG CTGTGCGTTG CGCTCGGCGC GATCGGCGGC
TGGCAGGCGC ACGGCTGGAG CGGCGCGCCC GCCGCGCCGA TGAGCGACGC CGTCGCCGCG
TACAAGCTGA TGGTGGTCGA TCGCAGCGCG CGCGTCGACG TCGCGCAAAA GCAGCCGGGC
GAATTACAGG CGTGGGTCGC GCGCGCGCTC GGCGCGGCCG CGCGGCTACC GGATCTGAGC
AGCGCGGGCT TCACGCCCGT CGGCGGGCGG CTCTTCGCGA CCGAACGCGG CGCGGCCGCG
ATGGTGCTGT ACGAGGACGC GGCCGGGCGC ACGCTGAGCT TCTATATTCG GCCGCCCGAG
TCGGCGAACC GTCTGCTCGC GGCAGGCGAG CGCGCCGACG GCGCGCTGCT CGCGCGCTAC
GGATCGGCGC GCGGGTTCAA TTACGCGGTG GTCGGGCGCG CGGACAGTGT CGGCGAGGCA
GCCGTCGCGC GCGCGCTCGA GGTCGAGGGG CGGAGCTGA
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| Protein sequence | MNIPPDEHDL HAYVDGRLDA DARTAVKRWL ALHPARAEQV RRWRQDAQQL RAALDSVPTP
APTRTLDPAV LRARRAGRAR ARLAMAASLV LCVALGAIGG WQAHGWSGAP AAPMSDAVAA
YKLMVVDRSA RVDVAQKQPG ELQAWVARAL GAAARLPDLS SAGFTPVGGR LFATERGAAA
MVLYEDAAGR TLSFYIRPPE SANRLLAAGE RADGALLARY GSARGFNYAV VGRADSVGEA
AVARALEVEG RS
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