| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_0056 |
|---|
| Symbol | |
|---|
| ID | 4900076 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 1106a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009076 |
|---|
| Strand | - |
|---|
| Start bp | 54090 |
|---|
| End bp | 55349 |
|---|
| Gene Length | 1260 bp |
|---|
| Protein Length | 419 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640133286 |
|---|
| Product | putative ABC transporter, substrate-binding protein |
|---|
| Protein accession | YP_001064341 |
|---|
| Protein GI | 126452961 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCCGC TTTCCCTCAA CATGAAGCGC GCGCTTGCCG GCGCGTGCAT CGGCGCCGCG
GGATTTCTCG CGCAACAGGC GGCGCTCGCG CAGAGCTGCG GGCTCGCGAA CGGCAAGCCC
GCGACGGGCG CGCCGATTCC GATCGGCGCG ATCGTCGGCA AGACCGGCCC CGACGACTTC
AGCTCGTCGG CACGCGCGGC CGCCGCGTAT TTCAAGTGCG TGAACGCGAA CGGCGGCATC
AACGGCCGGC CTGTCCAGTA TCTCGTCGAA GACGATCAAT GGAATCCGGA AACGGCGTCG
CAGGTCGCCT CGAAACTCGT ACGCGACCGC AAGGTGCTCG CGCTCGCGGG CAACGCGAGC
TTCGTCGAAT GCGGCGCGAA CGCGAAGTTC TACGAACAGG AGAACGTGAT CGCGATCGCC
GGCGTCGGCG TGCCGCGCGA ATGCTATTTC GCGCGCAACT ACGCGCCGCT CAACATGGGG
CCGCGCCTGT CGATGACGGA GGCGGCGCTG TACGCGAAGC AGCAGTACAA GGCGACGCGG
ATGGTGTGCA TCGCGCCGAA CATCCCGAGC CTCGGCGCTT GGTCGTGCGA AGGGCCGGCG
CTCTGGGGCA AGCGCAACGG CGTGAGTGTC GACACGATCG TGATGGACCC CGACTCCGCC
GATCCGACGT CGGTCGTGCT GCAGGCGGCG TCGAAGAATC CGCAGGCGAT CCTGCTCGGG
CTGCCGAAAG GGCTGATGGT GCCGATCCTG TCGGCCGCCG AGCAGCAGAA CCTCGGCCGG
CGGATTCACT TCGTCTCGGC GGCGTCCGGC TACGACCTCG GCGTGCCGAA GGCGATCGGC
CCGTACTGGA AGGGCAATTT CGACGTGAAC CTCGAGTTCC AGCCGCTCGA CGCGCAAACG
CCGGACAACC GGAACTGGCT CGCGGTGATG GACAAGTACG GCGACAGGAA GGACCCGCGC
GACACGTTCT CGCAGGCGGG CTATCTGGCC GCGCGGCTCG TGACCGACAC GCTGCTGAAA
CTGCCCGCGA ACCAGCTCGA TCGCGCGCAC GTGACGGCCG CGCTGCGCGA GGTGAAGGAC
TTCCGCAGCG ACATCCTGTG CGGCCCGTTC TACGTCGGCG CGGGCGAGCG GCACAACGCG
AACAACGCGG GCCGGATGGC GCAATCGACG GGCACGGGCT GGAAGACGGT GTCGACGTGC
CAGGCGGTCG ACGATCCGCA ACTCGCCGAC ATCCGCGCGG CCGAAAAGAA GATGCACTGA
|
|---|
| Protein sequence | MKPLSLNMKR ALAGACIGAA GFLAQQAALA QSCGLANGKP ATGAPIPIGA IVGKTGPDDF
SSSARAAAAY FKCVNANGGI NGRPVQYLVE DDQWNPETAS QVASKLVRDR KVLALAGNAS
FVECGANAKF YEQENVIAIA GVGVPRECYF ARNYAPLNMG PRLSMTEAAL YAKQQYKATR
MVCIAPNIPS LGAWSCEGPA LWGKRNGVSV DTIVMDPDSA DPTSVVLQAA SKNPQAILLG
LPKGLMVPIL SAAEQQNLGR RIHFVSAASG YDLGVPKAIG PYWKGNFDVN LEFQPLDAQT
PDNRNWLAVM DKYGDRKDPR DTFSQAGYLA ARLVTDTLLK LPANQLDRAH VTAALREVKD
FRSDILCGPF YVGAGERHNA NNAGRMAQST GTGWKTVSTC QAVDDPQLAD IRAAEKKMH
|
|---|
| |