Gene BURPS1106A_0030 details

Gene Information

• Locus tag: BURPS1106A_0030
• Symbol: fliN
• ID: 4901622
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia pseudomallei 1106a
• Kingdom: Bacteria
• Replicon accession: NC_009076
• Strand: +
• Start bp: 29728
• End bp: 30225
• Gene Length: 498 bp
• Protein Length: 165 aa
• Translation table: 11
• GC content: 68%
• IMG OID: 640133260
• Product: flagellar motor switch protein FliN
• Protein accession: YP_001064315
• Protein GI: 126454703
• COG category: [N] Cell motility; [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG1886] Flagellar motor switch/type III secretory pathway protein
• TIGRFAM ID: [TIGR02480] flagellar motor switch protein FliN

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACTGAGT TGAACTCGAC CCCCGAGGCC GACGGCATCG ACGAGCCGGC GTTTGCGGAC 
ACCGCGATGA GCGCTGCCGC GGCCGGGAAC GCGGCGGGTG CCGCGCCGCA GGAGGAAATG 
GCGATGGACG ACTGGGCCGC CGCGCTCGCC GAGCAGAATC AGCAGCCGAT CGAGACGGGC 
GCGACGGGCG CCGGCGTGTT CCGGCCGCTG TCGAAGGCCA CGGCGAGCTC GACGCACAAC 
GACATCGACC TGATTCTCGA CATCCCGGTC AAGATGACGG TCGAGCTCGG CCGCACGAAG 
ATCGCGATCC GCAACCTGCT GCAGCTCGCG CAGGGCTCGG TGGTCGAGCT CGACGGGCTC 
GCCGGCGAGC CGATGGACGT GCTCGTCAAC GGCTGCCTGA TCGCGCAGGG CGAAGTGGTG 
GTCGTCAACG ACAAGTTCGG CATCCGGCTC ACCGACATCA TCACGCCGTC CGAACGCATC 
CGGAAGCTGA ACCGATGA 

 

Protein sequence

MTELNSTPEA DGIDEPAFAD TAMSAAAAGN AAGAAPQEEM AMDDWAAALA EQNQQPIETG 
ATGAGVFRPL SKATASSTHN DIDLILDIPV KMTVELGRTK IAIRNLLQLA QGSVVELDGL 
AGEPMDVLVN GCLIAQGEVV VVNDKFGIRL TDIITPSERI RKLNR