| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_0023 |
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| Symbol | |
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| ID | 4902041 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1106a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009076 |
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| Strand | + |
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| Start bp | 23442 |
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| End bp | 25004 |
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| Gene Length | 1563 bp |
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| Protein Length | 520 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640133253 |
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| Product | EmrB/QacA family drug resistance transporter |
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| Protein accession | YP_001064308 |
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| Protein GI | 126455044 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.636069 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTGCGA CGGCCCCCGC TTCCCCTTCC CGCTCCGCCG AGCCGGCGCC GCTGTCGGGC
GGCACGCTCG CGCTGCTGAC GATCGGGCTC GCGCTCGGCA CGTTCATGGA GGTGCTCGAC
ACGTCGATCG CGAATGTCGC GGTGCCGACG ATCTCCGGCA GCCTCGGCGT CGCGACGAGC
GAAGGCACGT GGGTGATCTC GTCGTATTCG GTCGCCTCCG CGATCGCGGT GCCGCTGACC
GGCTGGCTCG CGCGGCGGGT CGGCGAGGTG CGGCTGTTCA CGCTGTCGGT GCTCGCGTTC
ACGATCGCGT CCGCGCTCTG CGGCCTCGCG GAGAACTTCG AGACGCTGAT CGCGTTCCGG
CTGTTGCAGG GGCTCGTGTC GGGGCCGATG GTGCCGCTGT CGCAGACGAT CCTGATGCGC
AGCTATCCGC CCGCGAAGCG CGGGCTCGCG CTCGGCCTGT GGGCGATGAC GGTGATCGTC
GCGCCGATCT TCGGCCCGCT GCTCGGCGGC TGGATCAGCG ACAACTACAC GTGGCCGTGG
ATCTTCTATA TCAACCTGCC GATCGGCGTG TTCTCCGCCG CGTGCGCGTT CTTCCTGTTG
CGCGGCCGCG AGACGAAGAC GACGAAGCAG CGGATCGACG CGATCGGGCT CGCGCTGCTC
GTGATCGGCG TGTCGTGCCT GCAGATGATG CTCGACCTCG GCAAGGATCG CGACTGGTTC
AACTCGACGT TCATCACCTC GCTCGCGCTG ATCGCCGTCG TGTCGCTCGC GTTCATGCTC
GTGTGGGAAT CCACCGAGAA GGAGCCGGTC GTCGACCTGT CGCTCTTCAA GGACCGCAAC
TTCGCGCTCG GCGCGATGAT CATCTCGTTC GGCTTCATGG CGTTCTTCGG CTCGGTCGTG
ATCTTTCCGC TGTGGCTGCA GACCGTGATG GGCTACACGG CGGGCCTCGC CGGCCTCGCC
ACGGCGCCCG TCGGCATCCT CGCGCTCGTG CTCTCGCCGA TGATCGGCCG CAACATGCAC
CGGCTCGATC TGCGGATGGT CGCGAGCTTC GCGTTCGTCG TGTTCGCCGT CGTGTCGATC
TGGAATTCGA TGTTTACGCT CGACGTGCCG TTCAACCATG TGATCCTGCC GCGGCTCGTG
CAGGGCATCG GCGTCGCGTG CTTTTTCGTG CCGATGACGA CGATCACGCT CTCCAGCATT
CCCGACGAGC GGCTCGCGAG CGCGTCGGGG CTGTCGAACT TCCTGCGTAC GCTGTCGGGC
GCGATCGGCA CCGCGGTGAG CTCGACGTTC TGGGAAAACG ACGCGATCTA TCACCACGCG
CGGCTCGCCG AATCGGTGAA CGTGTATGCG CAGAGCACGC TCGACTATCA AGGCGCGCTC
GCGCGGCTCG GCGTGATGGG CGACGTGTCG ACCGCGCAGA TCAACCAGAT CGTCACGCAG
CAGGGCTTCA TGATGGCGAC CAACGACTTC TTCCACATTT CGGCGCTCGC GTTCGTCGCG
CTCGCGGCGC TCGTGTGGGT GACGAAGCCG AAGAAAGGGG CCGGGCCCGC GATCGGGCAC
TGA
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| Protein sequence | MAATAPASPS RSAEPAPLSG GTLALLTIGL ALGTFMEVLD TSIANVAVPT ISGSLGVATS
EGTWVISSYS VASAIAVPLT GWLARRVGEV RLFTLSVLAF TIASALCGLA ENFETLIAFR
LLQGLVSGPM VPLSQTILMR SYPPAKRGLA LGLWAMTVIV APIFGPLLGG WISDNYTWPW
IFYINLPIGV FSAACAFFLL RGRETKTTKQ RIDAIGLALL VIGVSCLQMM LDLGKDRDWF
NSTFITSLAL IAVVSLAFML VWESTEKEPV VDLSLFKDRN FALGAMIISF GFMAFFGSVV
IFPLWLQTVM GYTAGLAGLA TAPVGILALV LSPMIGRNMH RLDLRMVASF AFVVFAVVSI
WNSMFTLDVP FNHVILPRLV QGIGVACFFV PMTTITLSSI PDERLASASG LSNFLRTLSG
AIGTAVSSTF WENDAIYHHA RLAESVNVYA QSTLDYQGAL ARLGVMGDVS TAQINQIVTQ
QGFMMATNDF FHISALAFVA LAALVWVTKP KKGAGPAIGH
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