Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1106A_0004 |
Symbol | hupA |
ID | 4900231 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1106a |
Kingdom | Bacteria |
Replicon accession | NC_009076 |
Strand | + |
Start bp | 5488 |
End bp | 5766 |
Gene Length | 279 bp |
Protein Length | 92 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640133234 |
Product | DNA-binding protein HU-alpha |
Protein accession | YP_001064289 |
Protein GI | 126453925 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0776] Bacterial nucleoid DNA-binding protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACAAAC AGGAACTGAT CGACGCCGTC GCCGCCCAGA CGGGCGCCAG CAAGGCTCAA ACCGGCGAAA CGCTGGACAC GCTCCTCGAA GTGATCAAGA AGGCTGTGTC GAAAGGCGAC TCAGTTCAAC TGATCGGCTT CGGCAGCTTC GGCTCGGGCA AGCGCGCAGC GCGCACCGGC CGCAACCCCA AGACGGGCGA GACCATCAAG ATCCCGGCAG CCAAGACGGT CAAGTTCACG GCTGGCAAGG CGTTCAAGGA CGCAGTGAAC AAGCGCTGA
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Protein sequence | MNKQELIDAV AAQTGASKAQ TGETLDTLLE VIKKAVSKGD SVQLIGFGSF GSGKRAARTG RNPKTGETIK IPAAKTVKFT AGKAFKDAVN KR
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