| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS668_A3202 |
|---|
| Symbol | |
|---|
| ID | 4886284 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 668 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009075 |
|---|
| Strand | + |
|---|
| Start bp | 3028355 |
|---|
| End bp | 3030253 |
|---|
| Gene Length | 1899 bp |
|---|
| Protein Length | 632 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640133138 |
|---|
| Product | GMC oxidoreductase |
|---|
| Protein accession | YP_001064193 |
|---|
| Protein GI | 126443879 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTCGGCG CAACGCGCTC GACACTATGG GGTTCTCGTG AGCGGCCGCG GATCGCGGCG
GCGCGCGCGC CGGGCGCCGC CGCGATCCGG ATGCGCGAAG AGGCGCGGGA ATGCGCGGGA
CCACGCGGCG CAGGCCGTGC GCCGCATCGC GCAACGGCGG CCAGCGGGAA AACAGGGAGA
CGAACCGTTC GTGCACCGTC GCGCGCGCGG GCCGGTTCGA ACAATCAAAA GGTGAACCGA
ATGAAGCAGC AGTCCTACGA TTACGACTAC GTCGTGGTCG GCTCCGGCTT CGGCGGCAGC
GTCTCGGCGC TGCGTCTGTC CGAGAAAGGC TATCGTGTGC TCGTGATCGA GCAGGGCCGT
CGCTGGACGC CCGAGAACCT GCCGGAAAGC ACGTGGAACC TGTCGCGCTG GCAATGGCGC
CCCGCGCTCG GGCTGCGCGG CTTCTTCAGC ATGCGCTTTT TCAGGCACGT CGTCGTGCTG
CACGGCAATG CGGTGGGCGG CGGCTCGATC ACGTACGCGA ACACGCTGCT CGTGCCGCCC
GACAAGGTCT GGCGCGAAGG CACATGGGCC GGCCTCGAGG ACTGGGAGCG CGTGATGCCC
GCGCACTACG CCACCGCGAA GCGCATGCTC GGCGTCGTCA CGAACCGGCG AATGGATGCG
GCCGACTTCC GGTTGAAGGA CATGGCGAAG CTGATCGGCG TCGAGAAGAG CTTCTATCCG
ACCGAGGTCG GCGTGTTCTT CGGCGACGAC GCCGACGCGC CCGGCACGCG CTACGCCGAT
CCGTACTTCG GCGGCGCGGG CCCGGAGCGC ACGTCGTGCA TCGGCTGCGG CGGCTGCATG
GTCGGCTGCC GCCACGGCGC GAAGAACACG CTCGACCGCA ATTACCTGTA TCTCGCCGAG
CGCCTCGGCG CGCAGGTGCG CGAGCAGACG AAGGTCGTCG ACGTGCGCCC GCTCGACGCG
CGCGCCGACG GCGCGGCGGG CTACGCGGTC GAAGCGGTGT CGCTCGCGGC GGGCGCGCGC
GGCGCGAAAA GCCGCCTCAC GTGCCGCGGC GTCGTGTTCG CCGCATCCTC GCTCGGCACG
CAGGATCTGC TGATGCGCCT GAAGGAAAAG GGCTCGCTGC CCCGGCTGTC GGACGCGCTC
GGCAAGCGCG TGCGCACGAA CGCCGAATCG CTGATCGGCG TGCGCTTTCC GAAATCGCGC
GTCGATCTGT CGAAGGGCGT GGCGATCGGC TCGGGCATCT ACATCGACGA GCACACGCAC
ATCGAGGCCA CCCGCTATCC TTCGGGCTCC GACACGATGG GGCTGCTCAC GACCGTGCTC
ACGCGCGGCG CGCCGGGCGG CCTGCGTGTG CTCGTGTGGC TCGGCGCGCT CGCGAAGCTC
GTTCTCACGC GACCGCTGAG CGCGTGGCGG ATGATCGACC CGCGCGGCTT CGCGCGCGAG
ACGATGATCT TCCTCTGCAT GCAGACGCTC GAAGGACACC TGACGATGCG CCTGAAGCGC
CGCTGGTTCT GGCCGTTCTC GAAGCAGCTC GCGACCTCCG GCGCGAAGAT CCCCGCCTAC
ATTCCGGCCG CGAACGACTT CGCGCAGAAG GCCGCGCGCG CGCTCGGCGG CGTGCCGATG
ACCTCGCTCA CCGAGATCCT GCTGAACGTG CCGATGACCG CGCATTGCAT GGGCGGCGCG
GCGATGGCGC GCGACGCGCG CGACGGCGTG TGCGACGGCC GCAGCCGCGT GTTCGGCTAT
CGGAACATGT ACGTCTGCGA CGGCTCGGTG CTCGGCGCGA ACCTCGGCGT CAACCCGAGC
CTCACGATCA CGGCGCTCGC CGAGCATGCG ATGAGCCACG TGCCCGCCGC GCGCGAGCAG
CGGTGGGACA GTACCGCGGA GACGCTTGTC GCCGCATGA
|
|---|
| Protein sequence | MLGATRSTLW GSRERPRIAA ARAPGAAAIR MREEARECAG PRGAGRAPHR ATAASGKTGR
RTVRAPSRAR AGSNNQKVNR MKQQSYDYDY VVVGSGFGGS VSALRLSEKG YRVLVIEQGR
RWTPENLPES TWNLSRWQWR PALGLRGFFS MRFFRHVVVL HGNAVGGGSI TYANTLLVPP
DKVWREGTWA GLEDWERVMP AHYATAKRML GVVTNRRMDA ADFRLKDMAK LIGVEKSFYP
TEVGVFFGDD ADAPGTRYAD PYFGGAGPER TSCIGCGGCM VGCRHGAKNT LDRNYLYLAE
RLGAQVREQT KVVDVRPLDA RADGAAGYAV EAVSLAAGAR GAKSRLTCRG VVFAASSLGT
QDLLMRLKEK GSLPRLSDAL GKRVRTNAES LIGVRFPKSR VDLSKGVAIG SGIYIDEHTH
IEATRYPSGS DTMGLLTTVL TRGAPGGLRV LVWLGALAKL VLTRPLSAWR MIDPRGFARE
TMIFLCMQTL EGHLTMRLKR RWFWPFSKQL ATSGAKIPAY IPAANDFAQK AARALGGVPM
TSLTEILLNV PMTAHCMGGA AMARDARDGV CDGRSRVFGY RNMYVCDGSV LGANLGVNPS
LTITALAEHA MSHVPAAREQ RWDSTAETLV AA
|
|---|
| |