| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS668_A2958 |
|---|
| Symbol | |
|---|
| ID | 4887370 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 668 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009075 |
|---|
| Strand | - |
|---|
| Start bp | 2811352 |
|---|
| End bp | 2811843 |
|---|
| Gene Length | 492 bp |
|---|
| Protein Length | 163 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640132894 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001063949 |
|---|
| Protein GI | 126444537 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3157] Hemolysin-coregulated protein (uncharacterized) |
|---|
| TIGRFAM ID | [TIGR03344] type VI secretion system effector, Hcp1 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGCGTCG CAATGTTTAT GAAAGTGGAC GGCGTCACCG GCGAATCGGC CGACGCGCAG
CACAAGGGCT GGACCGACAT CCAGTCGTTC TCATGGGGCG CGAGCCAGCC GGGCGCGATG
GCGAGCGGCA GCGGCGGCAA CGCGGGCAAG GCGAGCTTCA ACGATCTCGT CGTCGCCGCG
TACATGGACA AGGGCGCAAC GGCGATCATC AAGAACTGCG CGAGCGGCAA GCACCTGCCG
ACGGTCGAGA TATCGGCGTG CAAGACGGGC GGCTCGCAGA TCGAGTTCAT GCGCGTGACG
CTGCAGGAAG TGCTCGTCAC GTCCGCGCAG ATCGCGGGCG TGGACCCGGG CGACGCGGCC
GACCGGCTGA TGATGCAGTA CGGTTTTCAG GCCGCGAAGG TCAAGAAGCA GTACTGGCAG
CAGAACGACA ACGGCGGCAA GGGCGCCGAA GTGTCGGTCG GCTGGAACAT CAAGGAGAAT
ACCGAGATGT GA
|
|---|
| Protein sequence | MGVAMFMKVD GVTGESADAQ HKGWTDIQSF SWGASQPGAM ASGSGGNAGK ASFNDLVVAA
YMDKGATAII KNCASGKHLP TVEISACKTG GSQIEFMRVT LQEVLVTSAQ IAGVDPGDAA
DRLMMQYGFQ AAKVKKQYWQ QNDNGGKGAE VSVGWNIKEN TEM
|
|---|
| |