| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS668_A2954 |
|---|
| Symbol | |
|---|
| ID | 4886819 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 668 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009075 |
|---|
| Strand | - |
|---|
| Start bp | 2804789 |
|---|
| End bp | 2807455 |
|---|
| Gene Length | 2667 bp |
|---|
| Protein Length | 888 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640132890 |
|---|
| Product | putative ATP-dependent Clp protease, ATP-binding subunit ClpB |
|---|
| Protein accession | YP_001063945 |
|---|
| Protein GI | 126442624 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
|---|
| TIGRFAM ID | [TIGR03345] type VI secretion ATPase, ClpV1 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.400792 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGATA TCGGCCGAGT GACCTTGTTT GGAAAACTGA ACACTTTTCT CTACGAGACC
CTGGAGCAGG CGACCGGCTT TTGCCGGCTG CGCGGCAATC CCTATGTCGA GCTCGCGCAC
TGGCTGAACC AGATGCTCCG GCGCCCGGAC AGCGACGTGC ACCGGATCCT GCGCCGCTTC
GACATCGACG CGGCGGCGAT CGACCGCGGG ATCGTTTCGG CGCTCGACCG GCTGCCGCGC
GGCGCGGGTT CCGTGTCCGA TCTGTCCGCG CACATCGATG ATGCGGTCGA ACGCGCATGG
GTGTACGCGA CGCTCAAGTA CGACGCGGCG CAGATTCGCG GCGCGGTGCT GCTGCTCGCG
CTCGTGAAGA CGCCGCAGCT GCGCAACGTG CTGTACGCGA TCGCGCGGGA CTTCGAGCGC
ATCGTGCCTG ACGTGCTTGC CGACGAGCTC GAACGGATCG TCACAGGCTC GCCCGAGGCG
CCGTCGCCCG CCGCGCGCGC GGCGGCGGGG GCGATCGGCG ACGCGGGGGC GGCGCCGTCC
GCCGCGCGCG AAGGCTCGGC GCTCGCGCGC TACGCGATCG ATCTGACCGC GCGTGCGCGC
GCGGGCGAGA TCGATCCGGT GGTCGGCCGC GACGGCGAGA TTCGGCAGAT CGTCGACATC
CTGCTGCGCC GCCGGCAGAA CAATCCGCTG CTCGTCGGCG AGGCGGGCGT CGGCAAGACC
GCGGTCGCCG AAGGCTTCGC GCTGCGCATC GTCGCGGGCG ACGTGCCGCC GCCGCTGCGC
GACGTCGAAC TGTATCTGCT CGACATCGGC TTGCTGCAGG CGGGCGCGAG CGTGAAGGGC
GAATTCGAGA GCCGCCTGCG CGGCGTGATC GACGAGGCGA GTTCGAGCGA GCGGCCCGTC
ATTCTGTTCA TCGACGAAGT ACACACGCTC GTCGGCGCGG GCGGCGCGGC GGGCACGGGC
GACGCGGCGA ACCTGTTGAA GCCCGCGCTC GCGCGCGGCC TGCTGCGCAC GATCGGCGCG
ACGACGTGGT CCGAATACAA GCAATACATC GAGAAGGACC CGGCGCTCAC GCGGCGCTTC
CAGCTCGTGC AGGTGCGCGA GCCGGAGGAG GGCGCGGCGC TGGCGATGCT GCGCGGGCTC
GCCGCGAAGC TGGAGGCGCA CCATCGCGTG CTCGTGCTCG ACGATGCGCT GCAGGCGGCC
GTCACGCTGT CGCATCGCTA CATTCCCGCG CGGCAGTTGC CGGACAAGGC GATCAGCCTG
CTCGACACCG CGTGCGCGCG CGTCGCGGTC AGCCAGCACG CGGTGCCCGC GCCGATCGAG
GACGTGCGGC GGCGGATCGA CAGCCTGCGC GTCGAGCGCG AGCTGATCGC GCGCGAGTGC
GCGCTCGGCG CGGGCGATGC GCAACGGCTC GATGCAATCG ATGCATCGAT CGCCGGCGAA
CAGGCCACGC TCGATGCGCT CGACGCGCGC TGGCAGGCGG CGCGCGACGC GCTCGGCAAG
ATCGTCGACT GGCGGGCCTC GCTGCTGGCC GACGATTCTT CGCGCGTGCT CGATGAGGCG
GCGCGCGCGG ACGTGCAGGC GAAGCTCTCG GCCGCGCTGC GCGCGCTCGC CGAATTGCAG
GGCGAGACGC CGCTCGTGCT GCCCGCGGTC GATACGCACG CGGTGGCCGC CGTGGTGTCC
GACTGGACCG GCATCCCGCT CGGGCGGATG GTGCGCGACG AGATGCAATC GGTGCTGAAG
CTCGCCGAGA CGCTCGCCGA GCGCGTGGTC GGCCAGCCGC ACGCGGTCGA GCTGATCGCC
GAGCGCATTC AGACCGCGCG CGCGCGGCTC GACGATCCGG CCAAGCCGCA CGGCGTGTTC
CTGCTGTGCG GGCCGTCCGG CGTCGGCAAG ACCGAGACGG CGCTCGCGCT CGCCGAGACG
CTGTACGGCG GCGAGCACAA CGCGATCACG ATCAACATGA GCGAGTTTCA GGAGGCGCAC
ACCGTATCGA CGCTCAAGGG CGCGCCGCCC GGCTACGTCG GCTACGGACA GGGCGGGGTG
CTGACCGAGG CGGTGCGGCG GCGGCCGTAC AGTGTCGTGC TGCTCGACGA AATCGAGAAG
GCGCACCGCG ACGTGCACGA GATCTTCTTT CAGGTGTTCG ACAAGGGCTG GATGGAAGAC
GGCGAGGGGC GCTATATCGA CTTTCGCAAC ACGGTGATCC TCCTCACGTC GAACGTCGGT
TCCGAGCGCG TGATGCAGCT GTGCCGCGAT CCGCAGCGCC TGCCCGATGC GCAGACCTTG
ACCGATGCGC TGCGCGCGCC GCTGCGCGAG GTGTTTCCCG CCGCGTTGTT GGGACGCCTG
ACGGTCGTTC CGTACTACCC GCTCACCGAC GAGATGCTCG CGCGGATCGT CGCATTGCAG
CTCGCGCGCA TCGAGCGGCG CATCGAAGCG CACCACGGCA TCGCGTTGCG CTGCGCGGAT
TCGGCGACCG CGCTGATCGC CGAGCGCTGC CGGACGATCG AATCCGGCGG CCGCATGGTC
GACGCGATTC TCACGCACAC GGTGCTGCCG CGCATCAGCC AGGAGATCCT GCGCGCGACG
ATCGAGGGGC GCGCGCTGCG GGCGATCGAC GTGAGCGCCG AAGACGGCCA GTTCGTTTAC
CGATTCGAAG AGGAGGGCGC GACGTGA
|
|---|
| Protein sequence | MSDIGRVTLF GKLNTFLYET LEQATGFCRL RGNPYVELAH WLNQMLRRPD SDVHRILRRF
DIDAAAIDRG IVSALDRLPR GAGSVSDLSA HIDDAVERAW VYATLKYDAA QIRGAVLLLA
LVKTPQLRNV LYAIARDFER IVPDVLADEL ERIVTGSPEA PSPAARAAAG AIGDAGAAPS
AAREGSALAR YAIDLTARAR AGEIDPVVGR DGEIRQIVDI LLRRRQNNPL LVGEAGVGKT
AVAEGFALRI VAGDVPPPLR DVELYLLDIG LLQAGASVKG EFESRLRGVI DEASSSERPV
ILFIDEVHTL VGAGGAAGTG DAANLLKPAL ARGLLRTIGA TTWSEYKQYI EKDPALTRRF
QLVQVREPEE GAALAMLRGL AAKLEAHHRV LVLDDALQAA VTLSHRYIPA RQLPDKAISL
LDTACARVAV SQHAVPAPIE DVRRRIDSLR VERELIAREC ALGAGDAQRL DAIDASIAGE
QATLDALDAR WQAARDALGK IVDWRASLLA DDSSRVLDEA ARADVQAKLS AALRALAELQ
GETPLVLPAV DTHAVAAVVS DWTGIPLGRM VRDEMQSVLK LAETLAERVV GQPHAVELIA
ERIQTARARL DDPAKPHGVF LLCGPSGVGK TETALALAET LYGGEHNAIT INMSEFQEAH
TVSTLKGAPP GYVGYGQGGV LTEAVRRRPY SVVLLDEIEK AHRDVHEIFF QVFDKGWMED
GEGRYIDFRN TVILLTSNVG SERVMQLCRD PQRLPDAQTL TDALRAPLRE VFPAALLGRL
TVVPYYPLTD EMLARIVALQ LARIERRIEA HHGIALRCAD SATALIAERC RTIESGGRMV
DAILTHTVLP RISQEILRAT IEGRALRAID VSAEDGQFVY RFEEEGAT
|
|---|
| |