| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS668_A2912 |
|---|
| Symbol | |
|---|
| ID | 4887187 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 668 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009075 |
|---|
| Strand | - |
|---|
| Start bp | 2763990 |
|---|
| End bp | 2765411 |
|---|
| Gene Length | 1422 bp |
|---|
| Protein Length | 473 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640132848 |
|---|
| Product | sphingosine-1-phosphate lyase |
|---|
| Protein accession | YP_001063903 |
|---|
| Protein GI | 126445497 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0076] Glutamate decarboxylase and related PLP-dependent proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.0389716 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATCTCG AAGAAGGCGT GAGGCAGCTC TATCCGTATG CGGCGGAATT CGGCGCGTTA
CATGAATTTC CCGAGCGCGG GATGCCGCGT GAGCGCTTGC TCGAAGAATT GCGGTCGATG
GCCGTGCGCG AAGATCGCAA ATGGGAGAGC GGCCGCTGCT CGGGCACGAT GTACTGCGGC
GACCACGAAC ATTATGCGTT CCTGAACGAA GCGTACGGGC TGTTCAGCCA TGTGAACGCG
TTGCAGCGCG ACCTGTGCCC GAGCATGAAC CGGATGGAAA GCGAGATCGT CGCGATGACG
GTTGCGCTAT TGCACGGCGA AGCCGTGCAG CGGCATGACG GCGCGCATCG CGCATGCGGC
GCGCTGAGCC TCGGCGGCAC CGAGAGCATT CTGAATGCGA CGCTCGCGTA TCGCGAGAAA
GCGCGCGCCG AGCGCGGCAT CGAGCGGCCG CGGATGATCT GGCCGGCATC CGCGCATCCG
GCGTTTCGCA AGGCCGCGCA TCTGTTCGGC TTCGACGTGA CCGTCGCGCC GATCGATCCC
GTCACGATGC AGGTCGATGC CGATTTCGTG CACGACGCGG TGGACGCGAA TACGGTGATG
CTCGTGGGCT CGGCATGCAA TTATCCGTAC GGCACGATCG ATCCGATCGG CGCGCTGTCG
GCGATCGCCG TCGAAAAGGA CGTGTGGCTG CACGTCGACG GCTGCCTCGG CGGCTGGATG
CTGCCGTGGG GCGAAGCGCT GGGCTATCCG GACATTCCGG CATTCGATTT CCGTCTGCCG
GGCGTCACGT CGATCTCGGC CGATACGCAC AAGTTCGGCT ACGGCCCGAA GGGCGGCTCG
GTGCTCGCGT GGCGCGACGC GAGCTTTCGG CGCCATCAGT ATTTTCTGAT GACCGATTGG
GTGGGCGGCG TCTATGGCTC GCCGGGGTTG ACGGGCAGCC GCTCGGGCGG CCTGATCGCG
GCGACGTGGG CGGCGCTGCG CAGCCTCGGG CGCGAAGGCT ACCTCGCGCG GGCGAAGGCG
ATCTTCGAGA CGGCCTTCGA CATGCAGGCC GCGGTGCGTG CGATTCCGGA GCTGCGCGTG
CTCGGCAAGC CGACGTTCTG CTTCGCGTTC ACCTCGGACG CGTTCGACAT CTATCACGTG
AACGATTTCA TGCGGCAGCG CGGCTGGCGC TTCAACGGGC TTCAGCATCC GGATGCGCTG
CACATGTGCG TGACGGGGCC GCAGACGCAG CCGGGCGTCG CCGAGCGGTT CCGGCAGGAC
CTGGGCGAAG CGGTCGAGCA TGCACGGCAT CGTGCGCACG CGCGGCCGCA GTCGAGCGGC
GTTTATGGCG GCGATGCGGC GGGGCTCGAT TTGCGTGACG ACGCGCGCGC GCGCGCGTTC
TTTACGCAGG TGCTCGATCT GTTTACCGAC TGTCCGCTCT AG
|
|---|
| Protein sequence | MDLEEGVRQL YPYAAEFGAL HEFPERGMPR ERLLEELRSM AVREDRKWES GRCSGTMYCG
DHEHYAFLNE AYGLFSHVNA LQRDLCPSMN RMESEIVAMT VALLHGEAVQ RHDGAHRACG
ALSLGGTESI LNATLAYREK ARAERGIERP RMIWPASAHP AFRKAAHLFG FDVTVAPIDP
VTMQVDADFV HDAVDANTVM LVGSACNYPY GTIDPIGALS AIAVEKDVWL HVDGCLGGWM
LPWGEALGYP DIPAFDFRLP GVTSISADTH KFGYGPKGGS VLAWRDASFR RHQYFLMTDW
VGGVYGSPGL TGSRSGGLIA ATWAALRSLG REGYLARAKA IFETAFDMQA AVRAIPELRV
LGKPTFCFAF TSDAFDIYHV NDFMRQRGWR FNGLQHPDAL HMCVTGPQTQ PGVAERFRQD
LGEAVEHARH RAHARPQSSG VYGGDAAGLD LRDDARARAF FTQVLDLFTD CPL
|
|---|
| |