| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS668_A2774 |
|---|
| Symbol | |
|---|
| ID | 4887542 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 668 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009075 |
|---|
| Strand | + |
|---|
| Start bp | 2644424 |
|---|
| End bp | 2645950 |
|---|
| Gene Length | 1527 bp |
|---|
| Protein Length | 508 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 640132710 |
|---|
| Product | Outer membrane protein |
|---|
| Protein accession | YP_001063766 |
|---|
| Protein GI | 126443184 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG1538] Outer membrane protein |
|---|
| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCATGC GCAACGATGC GCGTCACGAC GAACGGCATC AGCGGCGGCG CGGCATCGCG
CGCCGCGCGG CGCGGCACGC GGCCGCGCTC GCGCTGTGCG CGGCCGTGTC GGGCTGCCTG
TCGCTCGCGC CCGACTACGC GCGCAAGCCC CCGCCCGTGC CCGCCGCGTA CCCGGCCTAT
CCGGGCGAAC CGGGCGCCGG CTCGCGCACG CTCGAGCAGC TCGGCTGGCG CGCGTATTTC
GTCGATCCGC GCTTGCAGGC GCTGATCGAA ACCGCGCTCG CGAACAACCG CGATCTGCGG
ATCGCCGCGC AGCGCGTCGA GCAGGCGCGC GCGGCGTACG GCATCCGCCG CGCGGACCAA
TACCCGACGA TCGCCGCGAA CGCCGCATAT CTTCGCTTTC GCGAGCCGGG CGGCCTGCTG
CTGCCGAGCC CGATCATCGG CGAGCTGTAT TCGGCGTCGC TCAGCGAAGT GCAATGGGAA
ATCGATTTCT GGGGCCGCGT GCGCAGCCTG AAGGCGGCCG CGCTCGACAC GTTCCTCGCG
AGCGACGCGT CGCGCCGCGC GGTGACGGTG AGCCTGATCG GCCAGGTCGC CGACGCGTAT
CTCGCGCTGT GCGCGTACGA CGAGCGCCTC GCGCTCACCA ACGAGACGAT CGCGAGCCGC
CGCGACTCGC TGCGGATCTT CCGCCGGCGC TACGAGGAAG GTGCGATCTC GAAGCTCGAT
CTGACGCAAT CGGAAATCCT GCTGCAGCAG GCGCAAACGC TCGGCTCGCA GCTCCAGCAG
GCGCGCGACG TGCAGCAGCA CGCGCTCGAC CTGCTCGTCG GCACGAACGC GGCCGCGCGC
ACGCCCGCGT CGCTCGACGA CGCGAGCATC GCGCCCGATC TCGCGCCCGG CCTGCCGTCC
GAGCTGCTCG CGAACCGGCC CGACGTGGTC GCGGCCGAGT ATCAGTTGCG CGCCGCGCAC
GCGAACATCG GCGCGGCGCG CGCCGCGTTC TTTCCGCGCA TCGCGCTCAC GAGCTCGATC
GGCACCGGCA GCACCGAGCT GCACAACCTG TTCGCCTCCG GCACGGCCGC GTGGAACTTC
ATTCCGAACC TGTCGGTGCC GATCTTCGAC GCGGGCCGCA ACATCGGCAA CCTGAAGCTC
GCGAACGCGC GCCGCGACGA AGCGCTCGCC CAGTATGAGA AGACGATCCA GGCGGCGTTT
CGCGACGTCG CCGACGCGCT CGCCGCGCGC CACTGGCTCG CCGATCAGGT GCGCATCGCG
CAGGAAACGC TCGCGACGCA AGCCGAGCGC GCGCGGCTCG CGAAGCTGCG CTACGACAGC
GGCGCCGCGC GCTTTCTCGA AGTGCTCGAC GCGCAGCGCG ACTTGCTGAA CGCGCAGCAG
CAGCTCGTGC AGACGCGCCG CGCGCTGCTC GCGAGCCGCG TCGCGCTGTA CGCGGCGCTC
GGCGGGCGTC TGGACGAGCC CGCGCGCGAC GGCGCCGCGC CGCGCCCCTC TCCCGAACCC
TCAGCGAAAC AAGGTCCGTT GTCATGA
|
|---|
| Protein sequence | MTMRNDARHD ERHQRRRGIA RRAARHAAAL ALCAAVSGCL SLAPDYARKP PPVPAAYPAY
PGEPGAGSRT LEQLGWRAYF VDPRLQALIE TALANNRDLR IAAQRVEQAR AAYGIRRADQ
YPTIAANAAY LRFREPGGLL LPSPIIGELY SASLSEVQWE IDFWGRVRSL KAAALDTFLA
SDASRRAVTV SLIGQVADAY LALCAYDERL ALTNETIASR RDSLRIFRRR YEEGAISKLD
LTQSEILLQQ AQTLGSQLQQ ARDVQQHALD LLVGTNAAAR TPASLDDASI APDLAPGLPS
ELLANRPDVV AAEYQLRAAH ANIGAARAAF FPRIALTSSI GTGSTELHNL FASGTAAWNF
IPNLSVPIFD AGRNIGNLKL ANARRDEALA QYEKTIQAAF RDVADALAAR HWLADQVRIA
QETLATQAER ARLAKLRYDS GAARFLEVLD AQRDLLNAQQ QLVQTRRALL ASRVALYAAL
GGRLDEPARD GAAPRPSPEP SAKQGPLS
|
|---|
| |