Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS668_A1956 |
Symbol | |
ID | 4886172 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 668 |
Kingdom | Bacteria |
Replicon accession | NC_009075 |
Strand | + |
Start bp | 1896486 |
End bp | 1897676 |
Gene Length | 1191 bp |
Protein Length | 396 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 640131894 |
Product | transcriptional regulator |
Protein accession | YP_001062951 |
Protein GI | 126445123 |
COG category | [K] Transcription |
COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.976768 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCGCCG ACGTACCCGC CTCCCCCCTC GCCGCCGATT CCGCGCAGCC GCGCCTGCGC TTCGGGATCG TGCTGCTGCC GAACTTCACG CTGACCGCGT TCTCGGGGTT CGTCGACATG CTGCGGCTGT CCGCCGACGA CGGCGACCAC AGCAAGCCCG TGCGCTGCTC ATGGACCGTG ATCGGCGATA CGCTCGCGCC CGTGCGCGCG AGCTGCGGAA TCCAGCTGAC GCCGTGGCAG ACGTTCGACG CAGCCGACGC GTTCGACTAC GTGGTCGTCG TGGGCGGCCT GCTGCATTCG GGGCCGCAGG CCGGGCCGCA GACGCTCGAA TTCATCCGCC GCGCGGCCGC GGCGGGCGCG AACCTCGTCG GCATCTGCAC CGGCGCGTTC GCGCTGATGC GCGCGGGCGT GCTCGACGGG CACCGCGTGT GCGTGAGCTG GTTCCATTAT TGGGACTTCG TCGAGCGCTT TCCGGGCGCC GATCCGGATC TGCTGATCGC CGATCGGCTG TTCGTGATCG ACCGGCGGCG GATCACGTGC TCGGGCGGGC GCGCGTCGAT CGACGTCGCC GCGGCGATCC TGCTGCGCCA CTTCGATCAT GCGACGGTGC AAAAGGCGCT GCGCATCCTG CTCGTCGGCG AGATGCAGAA AGGCAACGCG CCGCAGCCGC ACCCGCCGGG GCTCGAGCCC GCGACGCATC CGAAGGTCAA GCGCGCGATC CTGCTGATGG AACAGCACGT CGGGCGCGCG CTGCCGCTCG ACGAACTCGC GTGCAAGCTC GACCTGTCGA CGCGGCAGCT CGAGCGGCTG TTCAAGGCCC AGACGGGCAA GAGCCCGCAG GCGTTCGCCA AGCAGGTGCG GCTGCGCACG GCCGCGTGGC TGCTGACGAG CTCGGACCGC ACCGTCGCCG ACATCGCGTC GAGCTGCGGG TTCGCCGACG CCTCGCACCT CGGGCGCGAG TTCCGCAAGC AGTTCGGCGC GCCGCCCGCG GCTTACCGCG AGAAAGGCGG CGCGGCGGGC GACGCGGATG CGGGTGCGGG TGCGGGTGCG GGTGCGGACG CTAACGCGGG CGCGATGGGC GATGCACGGC CCCGTCCAGA CGCGGATGGG GGACCGGAAG CGGATTTCGA CGCGAATACG CGAAAGCACC CCGACGACGA TCCGGCCGGC GGCGGGAGGG ACGCTCGCTG A
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Protein sequence | MTADVPASPL AADSAQPRLR FGIVLLPNFT LTAFSGFVDM LRLSADDGDH SKPVRCSWTV IGDTLAPVRA SCGIQLTPWQ TFDAADAFDY VVVVGGLLHS GPQAGPQTLE FIRRAAAAGA NLVGICTGAF ALMRAGVLDG HRVCVSWFHY WDFVERFPGA DPDLLIADRL FVIDRRRITC SGGRASIDVA AAILLRHFDH ATVQKALRIL LVGEMQKGNA PQPHPPGLEP ATHPKVKRAI LLMEQHVGRA LPLDELACKL DLSTRQLERL FKAQTGKSPQ AFAKQVRLRT AAWLLTSSDR TVADIASSCG FADASHLGRE FRKQFGAPPA AYREKGGAAG DADAGAGAGA GADANAGAMG DARPRPDADG GPEADFDANT RKHPDDDPAG GGRDAR
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