Gene BURPS668_A1955 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBURPS668_A1955 
SymbolsdaA 
ID4886285 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia pseudomallei 668 
KingdomBacteria 
Replicon accessionNC_009075 
Strand
Start bp1894813 
End bp1896327 
Gene Length1515 bp 
Protein Length504 aa 
Translation table11 
GC content67% 
IMG OID640131893 
ProductL-serine ammonia-lyase 
Protein accessionYP_001062950 
Protein GI126444199 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1760] L-serine deaminase 
TIGRFAM ID[TIGR00720] L-serine dehydratase, iron-sulfur-dependent, single chain form 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCGTCT GTCGCGGCGG TTGGCGGCGG CGTCCCACGC CGATGCCGTT TTTGTTCTAT 
CGGCGGATTT TACGCTTTGA TGTACTGACG CCCAACGTCA ACCAAGCATC GTCACGCAAG
GGCAGCCAGA TGAACGTCAG CGTTTTCGAT CTGTTCAAGA TCGGCATCGG TCCGTCGAGC
TCGCATACCG TCGGGCCGAT GATCGCCGCG TGCCGGTTCG CGTCGCACGT CGAGGACGCG
AACCTGCTCG GCTTCGTGCG CCGCGTGCGG GCCGAGCTGT ACGGCTCGCT CGGCGCGACG
GGCAAGGGCC ACGGCACCGA CAAGGCGGTG CTGCTCGGCC TCGAAGGGCA CTTGCCCGAT
TCGGTCGACC CCGATCTGAT CGAGCCCCGC TTGAAGGCGA TCCGCGCGGA GAAGTCGCTC
GCGTTGCTCG GCAAGCGCGG CATCCGCTTC GACGAGAAGG ACGACATCGG CTTCTACCGC
AAGCTGATGA GCGGCACGAG CGTCGTCCAT CCGAACGGCA TGCGCTTCCA GGCGTTCGAC
GAGCACGGCC AGTTGCTCGT CGAGAAGGAG TATTACTCGG TCGGCGGCGG CTTCGTCGTC
AATCGTGACG GCGATCGCGT GAACGGCGTG CGCGCGGCGG CCGACGTGCC GTATCCGTTT
CGCACCGGCG ACGATCTGAT GCGCGCGTGC CGCGCGAGCG GCCTGTCGAT CGCCGAGCTC
ACGTTTCGCA ACGAGTGCGC GCTGCGCCCG GCCGACGAGG TGCGCGCGGG CCTCGTCGCG
ATCTGGAGGA CGATGGCCGC GTGCGTCGAG CGCGGCTGCA AGGCCGACGG CGAGCTGCCC
GGCCCGATGC GCGTGAAGCG CCGCGCGGCC GAGCTCTACA CGCGGCTGCG TGATCGGTCG
GAGGAATCGC TGCGCGATCC GCTGTCGATG CTCGACTGGG TAAACCTCTA TGCGATGGCG
GTCAACGAGG AGAACGCGGC GGGCGGGCGT GTCGTCACCG CGCCGACGAA CGGCGCGGCG
GGCGTGATTC CGGCCGTGCT CCATTACTAC GTGAAGTTCG TGCCGGGCTC GAACGAGCAG
GGGATCGTCG ATTTCCTGCT GACCGCCGCC GCGATCGGGA TCATCTACAA GGAAACCGCG
TCGATCTCCG GCGCGGAGGT CGGCTGCCAG GGCGAGGTGG GCGTCGCGTG CTCGATGGCC
GCGGCCGCGC TCGCCGCGGT AATGGGCGGC ACGCCCGGCC AGGTCGAGAA CGCGGCCGAG
ATCGGCATGG AGCACAACCT CGGGATGACG TGCGATCCCG TGGGCGGCCT CGTGCAGATC
CCGTGCATCG AGCGCAACGC GATGGGCGCG ATCAAGGCGC TCAACGCGTC GCGCATCGCG
CTCAAGGGCG ACGGCCAGCA CTACGTGTCG CTCGATTCCG TCATCAAGAC GATGCGCGAG
ACGGGCGCCG ACATGAAGAC GAAATACAAG GAAACGTCGC GCGGCGGCCT CGCCGTGAAC
GTCATCGAAT GCTAA
 
Protein sequence
MAVCRGGWRR RPTPMPFLFY RRILRFDVLT PNVNQASSRK GSQMNVSVFD LFKIGIGPSS 
SHTVGPMIAA CRFASHVEDA NLLGFVRRVR AELYGSLGAT GKGHGTDKAV LLGLEGHLPD
SVDPDLIEPR LKAIRAEKSL ALLGKRGIRF DEKDDIGFYR KLMSGTSVVH PNGMRFQAFD
EHGQLLVEKE YYSVGGGFVV NRDGDRVNGV RAAADVPYPF RTGDDLMRAC RASGLSIAEL
TFRNECALRP ADEVRAGLVA IWRTMAACVE RGCKADGELP GPMRVKRRAA ELYTRLRDRS
EESLRDPLSM LDWVNLYAMA VNEENAAGGR VVTAPTNGAA GVIPAVLHYY VKFVPGSNEQ
GIVDFLLTAA AIGIIYKETA SISGAEVGCQ GEVGVACSMA AAALAAVMGG TPGQVENAAE
IGMEHNLGMT CDPVGGLVQI PCIERNAMGA IKALNASRIA LKGDGQHYVS LDSVIKTMRE
TGADMKTKYK ETSRGGLAVN VIEC