Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS668_A1955 |
Symbol | sdaA |
ID | 4886285 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 668 |
Kingdom | Bacteria |
Replicon accession | NC_009075 |
Strand | - |
Start bp | 1894813 |
End bp | 1896327 |
Gene Length | 1515 bp |
Protein Length | 504 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640131893 |
Product | L-serine ammonia-lyase |
Protein accession | YP_001062950 |
Protein GI | 126444199 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1760] L-serine deaminase |
TIGRFAM ID | [TIGR00720] L-serine dehydratase, iron-sulfur-dependent, single chain form |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCGTCT GTCGCGGCGG TTGGCGGCGG CGTCCCACGC CGATGCCGTT TTTGTTCTAT CGGCGGATTT TACGCTTTGA TGTACTGACG CCCAACGTCA ACCAAGCATC GTCACGCAAG GGCAGCCAGA TGAACGTCAG CGTTTTCGAT CTGTTCAAGA TCGGCATCGG TCCGTCGAGC TCGCATACCG TCGGGCCGAT GATCGCCGCG TGCCGGTTCG CGTCGCACGT CGAGGACGCG AACCTGCTCG GCTTCGTGCG CCGCGTGCGG GCCGAGCTGT ACGGCTCGCT CGGCGCGACG GGCAAGGGCC ACGGCACCGA CAAGGCGGTG CTGCTCGGCC TCGAAGGGCA CTTGCCCGAT TCGGTCGACC CCGATCTGAT CGAGCCCCGC TTGAAGGCGA TCCGCGCGGA GAAGTCGCTC GCGTTGCTCG GCAAGCGCGG CATCCGCTTC GACGAGAAGG ACGACATCGG CTTCTACCGC AAGCTGATGA GCGGCACGAG CGTCGTCCAT CCGAACGGCA TGCGCTTCCA GGCGTTCGAC GAGCACGGCC AGTTGCTCGT CGAGAAGGAG TATTACTCGG TCGGCGGCGG CTTCGTCGTC AATCGTGACG GCGATCGCGT GAACGGCGTG CGCGCGGCGG CCGACGTGCC GTATCCGTTT CGCACCGGCG ACGATCTGAT GCGCGCGTGC CGCGCGAGCG GCCTGTCGAT CGCCGAGCTC ACGTTTCGCA ACGAGTGCGC GCTGCGCCCG GCCGACGAGG TGCGCGCGGG CCTCGTCGCG ATCTGGAGGA CGATGGCCGC GTGCGTCGAG CGCGGCTGCA AGGCCGACGG CGAGCTGCCC GGCCCGATGC GCGTGAAGCG CCGCGCGGCC GAGCTCTACA CGCGGCTGCG TGATCGGTCG GAGGAATCGC TGCGCGATCC GCTGTCGATG CTCGACTGGG TAAACCTCTA TGCGATGGCG GTCAACGAGG AGAACGCGGC GGGCGGGCGT GTCGTCACCG CGCCGACGAA CGGCGCGGCG GGCGTGATTC CGGCCGTGCT CCATTACTAC GTGAAGTTCG TGCCGGGCTC GAACGAGCAG GGGATCGTCG ATTTCCTGCT GACCGCCGCC GCGATCGGGA TCATCTACAA GGAAACCGCG TCGATCTCCG GCGCGGAGGT CGGCTGCCAG GGCGAGGTGG GCGTCGCGTG CTCGATGGCC GCGGCCGCGC TCGCCGCGGT AATGGGCGGC ACGCCCGGCC AGGTCGAGAA CGCGGCCGAG ATCGGCATGG AGCACAACCT CGGGATGACG TGCGATCCCG TGGGCGGCCT CGTGCAGATC CCGTGCATCG AGCGCAACGC GATGGGCGCG ATCAAGGCGC TCAACGCGTC GCGCATCGCG CTCAAGGGCG ACGGCCAGCA CTACGTGTCG CTCGATTCCG TCATCAAGAC GATGCGCGAG ACGGGCGCCG ACATGAAGAC GAAATACAAG GAAACGTCGC GCGGCGGCCT CGCCGTGAAC GTCATCGAAT GCTAA
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Protein sequence | MAVCRGGWRR RPTPMPFLFY RRILRFDVLT PNVNQASSRK GSQMNVSVFD LFKIGIGPSS SHTVGPMIAA CRFASHVEDA NLLGFVRRVR AELYGSLGAT GKGHGTDKAV LLGLEGHLPD SVDPDLIEPR LKAIRAEKSL ALLGKRGIRF DEKDDIGFYR KLMSGTSVVH PNGMRFQAFD EHGQLLVEKE YYSVGGGFVV NRDGDRVNGV RAAADVPYPF RTGDDLMRAC RASGLSIAEL TFRNECALRP ADEVRAGLVA IWRTMAACVE RGCKADGELP GPMRVKRRAA ELYTRLRDRS EESLRDPLSM LDWVNLYAMA VNEENAAGGR VVTAPTNGAA GVIPAVLHYY VKFVPGSNEQ GIVDFLLTAA AIGIIYKETA SISGAEVGCQ GEVGVACSMA AAALAAVMGG TPGQVENAAE IGMEHNLGMT CDPVGGLVQI PCIERNAMGA IKALNASRIA LKGDGQHYVS LDSVIKTMRE TGADMKTKYK ETSRGGLAVN VIEC
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