| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS668_A1809 |
|---|
| Symbol | ilvA |
|---|
| ID | 4888464 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 668 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009075 |
|---|
| Strand | - |
|---|
| Start bp | 1768143 |
|---|
| End bp | 1769750 |
|---|
| Gene Length | 1608 bp |
|---|
| Protein Length | 535 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640131748 |
|---|
| Product | threonine dehydratase |
|---|
| Protein accession | YP_001062805 |
|---|
| Protein GI | 126443580 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1171] Threonine dehydratase |
|---|
| TIGRFAM ID | [TIGR01124] threonine ammonia-lyase, biosynthetic, long form |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAGTCAG ACGACGTCGT CACGGAAACC CCCGAAGCGC CCCCCCGCGA AGCCGTCGCG
CCCACGGCGA TCGCGCCGCG CGCGCGCACG CTCGACGATT ACCTGAAGCT GGTCCTGAAC
GCGCGCGTGT ACGACGTCGC GCGCGAGACG GCGCTCGAAC GCGCGCGCAG CCTGTCCGCG
CGGCTGGGCA ACGCCGTCTA CCTGAAGCGC GAGGACAACC AGCCGGTGTT CTCGTTCAAG
CTGCGCGGCG CGTACAACAA GATGGCGCAC ATCCCGGCCG ACGCGCTCGC GCGCGGGGTG
ATCACCGCGT CGGCGGGCAA CCATGCGCAG GGCGTCGCGT TCTCGGCCGC GCGGATGAAC
GTGAAGGCGG TGATCGTCGT GCCGGTGACG ACGCCGCAGG TGAAGGTCGA CGCGGTGCGC
GCGCACGGCG GGCCGACCGT CGAGGTGATC CAGGCGGGCG AATCGTACAG CGACGCGTAC
GCGCACGCGG TGAAGGTGCA GGCCGAGCGC GGCCTCACGT TCGTCCATCC GTTCGACGAT
CCGTACGTGA TCGCGGGCCA GGGCACGGTG GCGATGGAGA TCCTGCGCCA GCATCAGGGG
CCGATTCACG CGATCTTCGT GCCGATCGGC GGCGGCGGGC TCGCGGCGGG CGTGGCCGCG
TACGTGAAGG CGGTGCGCCC GGAGATCAAG GTGATCGGCG TGCAGACCGA CGATTCGTGC
GCGATGAAGC AATCGCTCGC GGCGGGCCGG CGCATCGAGC TCACCGAGGT GGGGCTCTTC
TCCGACGGCA CCGCGGTCAA GCTCGTCGGC GAGGAGACGT TCCGCCTCTG CGCGGCGTAT
CTCGACGAGG TCGTGACCGT CGATACCGAC GCGCTTTGCG CGGCGATCAA GGACGTGTTC
CAGGACACGC GCAGCGTGCT CGAGCCGGCC GGCTCGCTCG CGGTGGCGGG CGCGAAGCGG
TATGCGGAGC AGGCGGGCAT CGAGGGCGAG ACGCTCGTGG CGGTTACCTC CGGCGCGAAC
ATGAATTTCG ACCGGATGCG CTTCGTCGCC GAGCGCGCCG AGGTGGGCGA GGCGCGCGAG
GCGGTGTTCG CGGTGACGAT TCCCGAGGAG CGCGGCAGCT TCAAGCGCTT CTGCGCGCTC
GTCGGCGAGC GCAACGTGAC CGAGTTCAAC TACCGGATCG CCGATGCGCG ATCGGCGCAT
CTCTTCGTCG GCGTGCAGAT CGGGCATCGC GGCGATTCGG CGACGATCGC GGCGAGCTTC
GTCGCGCACG GCTTCGGCAC CGTCGATCTG AGCGGCGACG AGCTCGCGAA ACAGCACGTG
CGACACATGG TGGGCGGGCG CTCGCCGCTC GCGCACGACG AGCGGCTGTT CCGCTTCGAG
TTTCCCGAGC GGCCCGGCGC GCTGATGAAG TTCCTGTCGT CGATGGCGCC CGACTGGAAC
ATCAGCCTGT TCCATTACCG CAATCAGGGC GGCGACGCGA GCTCGATCCT CGTCGGCCTG
CAAGTGCCGC GGGCGGACCA CGCGGCGTTC GATCGCTTTC TCGCGGCGCT CGGTTATCCG
TATCGCGAGG AAACCGGTCA TCCCGCCTAT CGGTTGTTTC TCGGTTGA
|
|---|
| Protein sequence | MQSDDVVTET PEAPPREAVA PTAIAPRART LDDYLKLVLN ARVYDVARET ALERARSLSA
RLGNAVYLKR EDNQPVFSFK LRGAYNKMAH IPADALARGV ITASAGNHAQ GVAFSAARMN
VKAVIVVPVT TPQVKVDAVR AHGGPTVEVI QAGESYSDAY AHAVKVQAER GLTFVHPFDD
PYVIAGQGTV AMEILRQHQG PIHAIFVPIG GGGLAAGVAA YVKAVRPEIK VIGVQTDDSC
AMKQSLAAGR RIELTEVGLF SDGTAVKLVG EETFRLCAAY LDEVVTVDTD ALCAAIKDVF
QDTRSVLEPA GSLAVAGAKR YAEQAGIEGE TLVAVTSGAN MNFDRMRFVA ERAEVGEARE
AVFAVTIPEE RGSFKRFCAL VGERNVTEFN YRIADARSAH LFVGVQIGHR GDSATIAASF
VAHGFGTVDL SGDELAKQHV RHMVGGRSPL AHDERLFRFE FPERPGALMK FLSSMAPDWN
ISLFHYRNQG GDASSILVGL QVPRADHAAF DRFLAALGYP YREETGHPAY RLFLG
|
|---|
| |