| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS668_A1561 |
|---|
| Symbol | thiD |
|---|
| ID | 4886960 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 668 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009075 |
|---|
| Strand | - |
|---|
| Start bp | 1495388 |
|---|
| End bp | 1496395 |
|---|
| Gene Length | 1008 bp |
|---|
| Protein Length | 335 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 640131500 |
|---|
| Product | phosphomethylpyrimidine kinase |
|---|
| Protein accession | YP_001062557 |
|---|
| Protein GI | 126445131 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0351] Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase |
|---|
| TIGRFAM ID | [TIGR00097] phosphomethylpyrimidine kinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCGGCTC GAACGCCGCC GCCGCGCGCG CACGCCCGCA CGGGCCGAGG TCGCCCGACG
ACGGGCGCGA GCCGGCCGCC GACGCCGCGG CGGCCGGCCC GACCGACGGC CCACCGACGA
CGTGACGCGC GGCGCCGCCC GCGCGGCTCG CCGACGGCGC AGCGGCACAA TCACAACACG
ACGCAACATA ACGAAACACG AGGGAACATG ATCGCGAACG TACTGACGAT CGCCGGCACC
GACCCGACGG GCGGAGCGGG CATTCAGGCC GATCTCAAGG CATTTTCGGC AATGCGCGCA
TACGGGATGG CGGCGATCAC CGCGGTCGTC GCGCAGAACA CCACCGGCGT GCGCAGCTTC
CGCGCGCTCG ATCCGGCGTT CGTCGCCGAT CAGATCGACG CGGTGTTCGA CGACGTCGCC
GTGCACGCGG TGAAGATCGG CATGATCGCG ACGGCCGCGA TCGCCGAGGC GGTCGCCGCG
GCGCTCGTCA GGCATCGCGC GGCGCCCGTC GTGCTCGATC CGGTGATGGT CGCGAAAAGC
GGCGACCGGC TGCTCGATCC GGACGCCGTC GACGCGATCC GCGACAAGCT CGTGCCGATC
TCCACGCTGA TCACGCCGAA CCTGCCGGAA GCGGGCGTGC TGCTCGGCCG AAGCGAGCCG
CGCACGCTCG CCGAGATGCA CGCGGCGGCC GCCGAGCTGC ACGCGCTCGG TTCGCGCTGG
GTGCTGCTCA AGGGCGGGCA TCTGGCGGGC GAGCGCAGCG TCGACGTGCT GCGCGGCCCG
GCCGCCGCGA CGGTCGAGCT CTCCGCGCCG CGCGTCGCGA CGAACAACGA TCACGGCACC
GGCTGCACGC TGTCGGCCGC GATCGCGGCG CTGCTGCCGA GCCATTCGGT CGAGGACAGC
GTCTGCCAAG CCAAGGCTTA CCTGAGCGAC GCGCTCGCCG CGTCGGGCGA GCTCGAGGTC
GGTCGCGGGC ACGGCCCGGT CCATCATTTC CACGCGCTAT GGAACTGA
|
|---|
| Protein sequence | MAARTPPPRA HARTGRGRPT TGASRPPTPR RPARPTAHRR RDARRRPRGS PTAQRHNHNT
TQHNETRGNM IANVLTIAGT DPTGGAGIQA DLKAFSAMRA YGMAAITAVV AQNTTGVRSF
RALDPAFVAD QIDAVFDDVA VHAVKIGMIA TAAIAEAVAA ALVRHRAAPV VLDPVMVAKS
GDRLLDPDAV DAIRDKLVPI STLITPNLPE AGVLLGRSEP RTLAEMHAAA AELHALGSRW
VLLKGGHLAG ERSVDVLRGP AAATVELSAP RVATNNDHGT GCTLSAAIAA LLPSHSVEDS
VCQAKAYLSD ALAASGELEV GRGHGPVHHF HALWN
|
|---|
| |