Gene BURPS668_A1540 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBURPS668_A1540 
Symbol 
ID4888722 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia pseudomallei 668 
KingdomBacteria 
Replicon accessionNC_009075 
Strand
Start bp1476895 
End bp1477446 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content68% 
IMG OID640131479 
ProductProP effector 
Protein accessionYP_001062536 
Protein GI126445397 
COG category[T] Signal transduction mechanisms 
COG ID[COG3109] Activator of osmoprotectant transporter ProP 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.178573 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGCTTTG AGCAACTTGC GTCATTGCGC GATCAACTGG CGAAAGCCGC CGCGCAGAAG 
CGGGCGGCGA AGCAACCGCA GAAGCAACCG CAAAAGCACT CGCAGAAGCA CTCGCAGAAG
CGGGACGCCA AGCCGGCGGC TTCGCCGAGC TCGACGGATC CGGTGGTGCT GACGATCGCG
AAACTCCAGA AGCGGTTTCC GCAGGCGTTC CCGCGCAATC CCGCGCCGAA GGTGCCGCTC
AAGGTCGGCA TTCTCGAGGA CCTGGTGGGG CAGGCGAGCG CGCTGGGTCT GAGCGAAGCG
GAATTGCGCG ACGCGATGCG CACCTGGTGC CAGGGGAACC GATACTGGAC GTGCCTCGTC
GAAGGTGCCG TGCGAATCGA CCTGGCGGGC GGCGAAGCGG GGCGGGTATC GGCCGCCGAC
GCGAAGCGCG CGCGAATGCT GAAAGGGCGC CGCCCGGCGA AGCCGCGCGC GCAACCGTCC
AGGCCCGAGC AGGCTGCTCA GCAGCAACAG ACATCCGCGT GTCCGCCGCA GGGCGCGCAG
CGTACCGATT GA
 
Protein sequence
MGFEQLASLR DQLAKAAAQK RAAKQPQKQP QKHSQKHSQK RDAKPAASPS STDPVVLTIA 
KLQKRFPQAF PRNPAPKVPL KVGILEDLVG QASALGLSEA ELRDAMRTWC QGNRYWTCLV
EGAVRIDLAG GEAGRVSAAD AKRARMLKGR RPAKPRAQPS RPEQAAQQQQ TSACPPQGAQ
RTD