Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS668_A1540 |
Symbol | |
ID | 4888722 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 668 |
Kingdom | Bacteria |
Replicon accession | NC_009075 |
Strand | - |
Start bp | 1476895 |
End bp | 1477446 |
Gene Length | 552 bp |
Protein Length | 183 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640131479 |
Product | ProP effector |
Protein accession | YP_001062536 |
Protein GI | 126445397 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3109] Activator of osmoprotectant transporter ProP |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.178573 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGCTTTG AGCAACTTGC GTCATTGCGC GATCAACTGG CGAAAGCCGC CGCGCAGAAG CGGGCGGCGA AGCAACCGCA GAAGCAACCG CAAAAGCACT CGCAGAAGCA CTCGCAGAAG CGGGACGCCA AGCCGGCGGC TTCGCCGAGC TCGACGGATC CGGTGGTGCT GACGATCGCG AAACTCCAGA AGCGGTTTCC GCAGGCGTTC CCGCGCAATC CCGCGCCGAA GGTGCCGCTC AAGGTCGGCA TTCTCGAGGA CCTGGTGGGG CAGGCGAGCG CGCTGGGTCT GAGCGAAGCG GAATTGCGCG ACGCGATGCG CACCTGGTGC CAGGGGAACC GATACTGGAC GTGCCTCGTC GAAGGTGCCG TGCGAATCGA CCTGGCGGGC GGCGAAGCGG GGCGGGTATC GGCCGCCGAC GCGAAGCGCG CGCGAATGCT GAAAGGGCGC CGCCCGGCGA AGCCGCGCGC GCAACCGTCC AGGCCCGAGC AGGCTGCTCA GCAGCAACAG ACATCCGCGT GTCCGCCGCA GGGCGCGCAG CGTACCGATT GA
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Protein sequence | MGFEQLASLR DQLAKAAAQK RAAKQPQKQP QKHSQKHSQK RDAKPAASPS STDPVVLTIA KLQKRFPQAF PRNPAPKVPL KVGILEDLVG QASALGLSEA ELRDAMRTWC QGNRYWTCLV EGAVRIDLAG GEAGRVSAAD AKRARMLKGR RPAKPRAQPS RPEQAAQQQQ TSACPPQGAQ RTD
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