Gene BURPS668_A1490 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBURPS668_A1490 
Symbol 
ID4888761 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia pseudomallei 668 
KingdomBacteria 
Replicon accessionNC_009075 
Strand
Start bp1435941 
End bp1437026 
Gene Length1086 bp 
Protein Length361 aa 
Translation table11 
GC content71% 
IMG OID640131430 
Productcalcium/proton exchanger 
Protein accessionYP_001062487 
Protein GI126443857 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0387] Ca2+/H+ antiporter 
TIGRFAM ID[TIGR00378] calcium/proton exchanger (cax)
[TIGR00846] calcium/proton exchanger 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.687933 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGATCT CTTCGTCCGC CCTGCCGCGC TGGACGCTCG TCGCCCCGCT CGCCGCCTGG 
CTGGTGCTCG CGCTGTCGCG CGTCGTGCCG GCCGAAGGCT TCGCCATCGC ATTCGTCGCC
GCCGCGCTCG CGGGCGCGGT GTTCTCCGCC GTGCATCACG CCGAAGTCGT CGCGCACCGC
GTCGGCGAGC CGTTCGGCAC GCTCGTGCTC GCGATCGCCG TCACCGTGAT CGAGGTCGCG
CTGATCGTCT CGGTGATGCT GTCGGCCGGC CCCGAGAAAG CGGGGCTCGC GCGCGACACC
GTGTTCGCCG CGGTGATGAT CGTCTGCAAC GGGATCGTCG GGCTGTGCCT GCTCGTCGGC
GGCTGGCGGC ACGGCGAGCA GGACTTCCAG GGGCGCGGCG CGACGAAGGC GCTCGCGGTG
CTCGCGTCGC TGTCGGTGCT CTCGCTCGTG ATGCCGAACT ATCTGAGCGC CGCGCCGGGC
CCACGGCTGT CGACGTCGCA GCTCGCGTTC GCGGGCGTGT CCTCGCTCGT GCTGTACGGC
GTGTTCGTGT TCGTGCAGAC GGTTCGCCAT CGCGATTACT TCCTGATCGA CGGCAGCGCC
GACGAATCCG TCCATGCGGT GCCGCCGAGC GGCCGCACCG CGCTCACGAG CATCGCGTTC
CTGTTCGTGA GCCTCGTCGC GGTCGTGCTG CTCGCGAAGC TGCTGTCGCC CGCCGTCGAG
CGCACGGTGC TGCGGCTCGG CGCGCCCGAG GCGGCCGTCG GCATCGTGAT CGCCGCGCTC
GTGCTGCTGC CGGAAGGGCT CGCCGCCGTC GGCGCGGCGC GCGCGAACCG GCTGCAGACG
AGCATGAACC TCGCGCTCGG CTCGGCGCTC GCGAGCATCG GCCTGACGAT TCCGACCGTC
GCCGCCGTGT TCATCTGGAC GGGCGCGCCG CTCACGCTCG GCATCGGCGC AATGGAGACG
GTGCTGCTGT CGCTCACGCT GCTCGTCAGC ACGCTCACGC TCAGCCTGGG ACGCACGACG
GTGCTGCACG GCGTCGTGCA TCTGTCGCTG TTCGCCGCCT ATCTGTTCCT GTCGATCACG
CACTGA
 
Protein sequence
MPISSSALPR WTLVAPLAAW LVLALSRVVP AEGFAIAFVA AALAGAVFSA VHHAEVVAHR 
VGEPFGTLVL AIAVTVIEVA LIVSVMLSAG PEKAGLARDT VFAAVMIVCN GIVGLCLLVG
GWRHGEQDFQ GRGATKALAV LASLSVLSLV MPNYLSAAPG PRLSTSQLAF AGVSSLVLYG
VFVFVQTVRH RDYFLIDGSA DESVHAVPPS GRTALTSIAF LFVSLVAVVL LAKLLSPAVE
RTVLRLGAPE AAVGIVIAAL VLLPEGLAAV GAARANRLQT SMNLALGSAL ASIGLTIPTV
AAVFIWTGAP LTLGIGAMET VLLSLTLLVS TLTLSLGRTT VLHGVVHLSL FAAYLFLSIT
H