Gene BURPS668_A1062 details

Gene Information

• Locus tag: BURPS668_A1062
• ID: 4888110
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia pseudomallei 668
• Kingdom: Bacteria
• Replicon accession: NC_009075
• Strand: +
• Start bp: 1021860
• End bp: 1022540
• Gene Length: 681 bp
• Protein Length: 226 aa
• Translation table: 11
• GC content: 67%
• IMG OID: 640131001
• Product: DJ-1/PfpI family protein
• Protein accession: YP_001062060
• Protein GI: 126444635
• COG category: [R] General function prediction only
• COG ID: [COG0693] Putative intracellular protease/amidase

Plasmid Coverage information

• Num covering plasmid clones: 38
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAGATTC TCGTGGTTCT CACTTCGCAC GACGAACTCG GCACGACCGG CAAGAAAACC 
GGATTCTGGC TCGAGGAACT GGCCGCGCCG TACTACGCGC TGAAAGACGC CGGCGCCGAG 
CTCACGCTCG CGTCGCCGCG CGGCGGGCTG CCGCCCGTCG ATCCGAAGAG CGACGATCCG 
GCTTCACAGA CCGACGCGAC GCGCCGTTTC GCGAAGGACG CCGAAGCACA GGCCGCGCTC 
GCGTCGACGC GCAAACTCGC CGACGTGTCG ATCGACGATT ACGACGCGGT GTTCTATCCC 
GGCGGCCACG GCCCGCTGTG GGACCTCGCC GAGGACCGTC ATTCGATCGC GCTGATCGAG 
CGCGCGATCG CGACGAACAA GCCCGTCGCG GCCGTCTGCC ATGCGCCCGG CGTACTGCGC 
AACGTGAAGG ATCCGTCGGG CGCGTCGTTC GTGAAGGGCC TGAATGTCAC GGGCTTCTCG 
AACAGCGAGG AGGCGGCCGT CGAGCTCACC GAGGTCGTGC CGTTTCTCGT CGAGGACATG 
CTGAAGACGA ACGGCGGCAA TTACTCGCGC GCGGCCGACT GGGCGCCGCA CGTCGTCGTC 
GACGGGCTGC TCGTCACAGG GCAGAACCCG GCGTCGTCGG AGCCGGTTGC CGAGGCGCTG 
CTCAATCTGC TCGAGACGTA A 

 

Protein sequence

MKILVVLTSH DELGTTGKKT GFWLEELAAP YYALKDAGAE LTLASPRGGL PPVDPKSDDP 
ASQTDATRRF AKDAEAQAAL ASTRKLADVS IDDYDAVFYP GGHGPLWDLA EDRHSIALIE 
RAIATNKPVA AVCHAPGVLR NVKDPSGASF VKGLNVTGFS NSEEAAVELT EVVPFLVEDM 
LKTNGGNYSR AADWAPHVVV DGLLVTGQNP ASSEPVAEAL LNLLET