| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS668_A0805 |
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| Symbol | |
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| ID | 4887861 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 668 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009075 |
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| Strand | + |
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| Start bp | 780332 |
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| End bp | 783835 |
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| Gene Length | 3504 bp |
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| Protein Length | 1167 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640130745 |
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| Product | hypothetical protein |
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| Protein accession | YP_001061804 |
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| Protein GI | 126444923 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3523] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03348] type VI secretion protein IcmF |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00300591 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCCGCA CGAGCTTGAG AGTATTCGCG GCGATTCTGA TCGCGATCCT GATCTGGTGG
GTGGGGCCGC TGTTCGCGTT CGGCATCTAT CACCCGCTCG GCCCGGTGTG GGTGCGCGAG
ATCCTCGTCG CACTGGTGCT GATCTGGGGC TTCTGGCCGA CGCTCGCGCG GCTCTGGGCG
CGGCTCGCGA TGAGCCCGCG GCAGGTGAAG GTCGCGCCGA AGGCCAAGCA GCTCGATTTC
GTCGACAAGC ATCTGCGCAC CCTCGACCAG CAGTTGAAGG AGCGCTGGCG CAAGGAGCCG
CGCGGCCGCT GGAAGCGCTG GGTCGGCGCG CTCACGCGCG AGCATCGCAC GATGCTGCCG
TGGTATCTGG TGCTCGGCTC CGAGGGTAGC GGCAAGTCGA GCCTCGTCGC GAAGGCGGTG
AGCGTGTCCG GCTCGCTGCA GGACCGGGTG CTCGGCTCGG ACGCGACCTA CGGGCGCGGC
GACGACTTGA ACTTCCGCAT CACGCGCGAG GCGGTGTGGT TCGACGTCGG CGGCCGCTGG
AGCCTGCGCG CGGGCGCCGA CGAGGCCGAG TTCGACGCGT GGCGCAAGCT GCTGCGCGGG
ATGAGGCGGC TGCGCAGGGG CGCGCCGATC AGCGGCGTCG TGCTGTGCGT CGACGGCCTC
GAGATGATCG ATGCGCCGCT CGACGCGCGC AAGCGGCTGG CCGATTCGGT GCGCGCGCGG
CTCGAGGAGA TGCGCGAGGC GTTCGGCCAG CAGGTGCAGG TGTACGTTGC GCTGAACGGG
CTCGACCGGC TCGACGGCGC GGTCTCGACG CTGTCGCTGC TCGAGGCGTC GAAGTGGGTC
AAGGGCGTGG GCTTCAGCCT GCCCGACGAC GGCGCGCACG CCGACGCCGC GCGCGCGGAC
GCGAGCTGGC AGCACGCGCT GCAAGGGCTG CAGCAGCGGG TCCAGCAGCA GGTGCTGTAT
TCGGCGCCGG CGGCGACCGA GGTGTCGATG AACCACGCGC AGTTGCGCTT CGTCGAGACG
CTCAGCCGCC TGCAGAAGGC GCTCGTCGCG TGGCTGCACG TCGCGCTCGC GCCGGGCGAG
CCGCACACGG CCGCGCGGCT GCGCGGGGTG TGGCTGGGCT CGATGGCCGA GCTCGCGGAG
CCGCATCCGG CGGGCGCGGG CGGCGTCGGC TCGGCGGAGC TGCCCGTGCC GTCGCGCCCG
CTCAGCGAGC TGTGGACGCC GCTCATCCGG CAGGTGGCGC TCGAGCGCGA CGCGGTGCGC
CCGAGCGGGC CGAAGTCGTG GCGCGGGCGC CTGGGCGAGG CGCTGCGCTG GGGCGCGGTG
CCCCTCGTCG CGTTGAGCCT GCTGCTGTGG TTCGGCTGGG GCTACGTCAC CGAGCGCGAC
TATCTGGACG GCGTCTGGGC GCAGTTCACC GAGGCCAAGC GGCTCGCGCA GGCCGAGGCG
TCCTACGGCA ACGACGGCGG CTCGACGCTC ATCGAGATCG CGAATCAGAT GCGCTATGCG
CAACTGCAGG CCGAGGACGC CGCGCAGGGC ATGGCGACGC CGTACTTCGA GCACGGGCTC
GTCGCGGAGA CCGCGCGCGA GACCTACTAC CGGCACTTGC AGAAGATGCT GATGCCGGAG
CTGTACAACG AGGTGCGGCG CACGCTCGTG TCGCAGGTCG ACGGCAGCCC GGGCGACATC
TACCAGACGC TGAAGGTCTA CCTGATGCTC TGCCGCCCCG CGCGGCGCTC GGCGGACGAC
GTCGTGCGCT GGCTCGACGG CCGCTGGGAC GCGCTCTCGG GCGGGCAGTA CTCGGACGAC
GACCGCCGCT CGCTGCTCGC GCACGTGCGC ACGCTGATGT CGCTGAAGGA GGTGCCGGCC
ACGCCGGAGG ACGCGAACCT CGTGCGCTCG GCGCGCGCGA AGGCCGCGCA GATCCCGCTC
GTCACGCGCG TGCTGCAGCA CATCCACGCG CAGGGGCTGC CGCAGCAGGT CAACGACATC
TCGCTGTCGC GCGCGGCGGG CTTCGAGGCG TCGATGAGCC TGCGCATGCG CAGCAACGTG
CCGTCGACCG ACACCGCGGT GTCGGGCTGG TTCACGCGCG CGGGCTACAC GGACGTGTTC
CTGCCGCGCC TGCAGAAGAG CGCGCGCGCG ATGCTCGAGG AGGAGAGCTG GGTGCTGCGC
GACGAGACGC TGTCGGGCAA CAGCTTCCAG ATCGACGGAC TCGTGCAGAA GCTCGCCGAT
TCGGCGCGCA ACCAGTTCCT GCAGGACTAC ATCTCCGCGT GGCAGAACTT CCTGAACGAC
GTGACGGTGC GCGGCGTGAC GGGCCTGGAC GATGCGTCGC AGCTCGCCGC GGCGATGATG
GAGGCGCAAT CGCCGCTCGC GAACCTGCTG CGCTTCGCCG CGCGCGAGAC GACGCTCACG
GGCGCGAGCG ACGAAGGCAA CATCGACAGC TGGATCGATC GCCAGAAGTA CCGCTTCGAG
AAGGGGCGGC GGCAGGTCGT CGGCGAGCTG AGCGGGCAGC ATTACCGCAC GGTGCTGCTG
CCGGAGCACG TGGTCGAGGA GCACTTCCAG GCGATCCGCC AGCTCGCCGC GCAACTGAAC
CGCAACAACA CGATCGCGAA CAACCCGCTG TCGCGGCTGT TCGAGCCGCT GTACCGACAG
CTCGGGCTCG TCAACGGCGC GCTGCAGGCG GGCCAGGTGC TGCCCGCGCA GTACGACGCG
TTCTCGCGGC TGAAGGAGAC GGCCGCGCGC CAGCCGGAGC CGGTGCGCGG GATCATGCTC
GACCTCGTGA GCAGCGGCAG CACGATGACG ACGCGCGAAT CGGGCGCGCT GCTCAACCGG
GGCGCGGCGG GCGCGACGAA GATGGTCTGC GATCAGGGCT TCACGGGCCG CTATCCGATG
CGCCGCGGCG CGCAGGCGGA TGCGGGCGTG GAGGACTTCG AGCGGCTGTT CAGCGCGCAG
GGGCTGATGG CGACGTACTT CCGCGATCAC CTCGCCGCGT ATGTGGACAC ATCGGCCAAG
CCGTGGCAGG CGCTGCGCTC GAACGGCGGG CCGAACGGGA TGGTGAGCCA GTCGGTGCTG
AACTCGTACG AGACGGCCGA GCGCATCCGC GGCGCGATGC TCGACGATTC GGGGCACCTG
CGCGTGTCGA CCGTGCTGCG TTTCATCGAC ATGGATTCGC AGTTGTCCGA AGCGCAGCTG
AGCGTGGCCG GGCAGACGGT GCGCTTCGCG CACGGCGTGA CCTCGCCGCA CCGGGTGGAC
TGGACCAACC AGAACACGCA GCTCGCGATC AAGCTGCAGC TCAAATCGGT GGACGGCCGG
ATGACGACGC TGCAGTTCGA CGGGCCGTGG GCGCTGTTCC GCTTCTTCGA CGCGGGGCAG
GCGGTGGGCG GCACGGGCAC CGCGGACCGG CGCGAGCGGC TGTATCAGAC GAGCCTCGGC
ACGGTGCGCA TCGAATGGCA GGCGCTCACG CTGCCGTCGC CGATATGGTC GGGCATCCTG
CAGTCGTTCA GGTGTCCGTC GTGA
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| Protein sequence | MIRTSLRVFA AILIAILIWW VGPLFAFGIY HPLGPVWVRE ILVALVLIWG FWPTLARLWA
RLAMSPRQVK VAPKAKQLDF VDKHLRTLDQ QLKERWRKEP RGRWKRWVGA LTREHRTMLP
WYLVLGSEGS GKSSLVAKAV SVSGSLQDRV LGSDATYGRG DDLNFRITRE AVWFDVGGRW
SLRAGADEAE FDAWRKLLRG MRRLRRGAPI SGVVLCVDGL EMIDAPLDAR KRLADSVRAR
LEEMREAFGQ QVQVYVALNG LDRLDGAVST LSLLEASKWV KGVGFSLPDD GAHADAARAD
ASWQHALQGL QQRVQQQVLY SAPAATEVSM NHAQLRFVET LSRLQKALVA WLHVALAPGE
PHTAARLRGV WLGSMAELAE PHPAGAGGVG SAELPVPSRP LSELWTPLIR QVALERDAVR
PSGPKSWRGR LGEALRWGAV PLVALSLLLW FGWGYVTERD YLDGVWAQFT EAKRLAQAEA
SYGNDGGSTL IEIANQMRYA QLQAEDAAQG MATPYFEHGL VAETARETYY RHLQKMLMPE
LYNEVRRTLV SQVDGSPGDI YQTLKVYLML CRPARRSADD VVRWLDGRWD ALSGGQYSDD
DRRSLLAHVR TLMSLKEVPA TPEDANLVRS ARAKAAQIPL VTRVLQHIHA QGLPQQVNDI
SLSRAAGFEA SMSLRMRSNV PSTDTAVSGW FTRAGYTDVF LPRLQKSARA MLEEESWVLR
DETLSGNSFQ IDGLVQKLAD SARNQFLQDY ISAWQNFLND VTVRGVTGLD DASQLAAAMM
EAQSPLANLL RFAARETTLT GASDEGNIDS WIDRQKYRFE KGRRQVVGEL SGQHYRTVLL
PEHVVEEHFQ AIRQLAAQLN RNNTIANNPL SRLFEPLYRQ LGLVNGALQA GQVLPAQYDA
FSRLKETAAR QPEPVRGIML DLVSSGSTMT TRESGALLNR GAAGATKMVC DQGFTGRYPM
RRGAQADAGV EDFERLFSAQ GLMATYFRDH LAAYVDTSAK PWQALRSNGG PNGMVSQSVL
NSYETAERIR GAMLDDSGHL RVSTVLRFID MDSQLSEAQL SVAGQTVRFA HGVTSPHRVD
WTNQNTQLAI KLQLKSVDGR MTTLQFDGPW ALFRFFDAGQ AVGGTGTADR RERLYQTSLG
TVRIEWQALT LPSPIWSGIL QSFRCPS
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