Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS668_A0660 |
Symbol | |
ID | 4888581 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 668 |
Kingdom | Bacteria |
Replicon accession | NC_009075 |
Strand | + |
Start bp | 631048 |
End bp | 633681 |
Gene Length | 2634 bp |
Protein Length | 877 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640130600 |
Product | capsular polysaccharide biosynthesis/export protein |
Protein accession | YP_001061659 |
Protein GI | 126442748 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1596] Periplasmic protein involved in polysaccharide export |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTCGGC GTCGGCGCGC CGACGATGTG TTGCAGAAAG CGAGATGTTC AATTGACCGA AAGACAAGAA GCCGAATGAA CGTCAAGAGT CCTATTCTCC GGCACCCGCG TACATGGGCT GGTTTTTCGT TCCGCGATGG TCTGCCGTTC ATTCGTTTCG CCTCCCTGCG TTCGCTCGCG TGGCTGCTTC GCTGCGCCGT GTGTTTGTGG CCGTGCGCGT TCCCTGTGTT CGCGCATGCG CAAATCGTCC CTTTCGTTCC GTCCGCATCC GCATCCGCCG GCGCGGACGC GCGTTCGGCG GTGCCGCTGC CGCCGATCGA CGGCCTGCCG GCGGTGGACG GCCTGAGCGC GCGGCAACGC GACGCGCTTC AGCCGCCGCT GCCGGGCGCG AAGCTGACGA AGGACGCCAC GACGAAAGAC GGCCTGTTGA AGGACGGCGC CGCGCTGAAC GAGCCGCCGC GCCCCTGCGG GCCGCTCGGA TGCCGTGGCG AAGCGATCGA TTGCCCGCCG TCGGCCGACG GCCGGCCGAC GTCCATTACG CGCCGGGCGG ACGGCACGCC CGAATTGCCG GATCCGTGCG GGCGGCCGCG CGCCGCTTCG CAACCGGCGC TGACCGATTT TCAGGTCTTC GTGCAGCAGA GCACGGGCCG CGCGTTGCCG CTGTTCGGCT ACAACTTCTT TTCGACGACG ACGACCTACC GGTCGCTCGA CAACGTTCCG GTTCCCGACG ATTACGTGCT CGGCCCCGGC GACGAAGTGC TGCTGCACGC GTGGGGCGGC GTCGCGGGCG ATCAGCGCCT CGTCGTCGAC CGCAACGGTC AGGTGAGCAT TCCGGGCGTC GGTGTCGTGA CGGTGGCGGG CGCGCGCGCG TCCGAGCTCG ATTCGCTGCT GCGCAGCGGG CTTGGCCGAT ATTTCACGGA TTTCAACGTG AATGCGGCGC TCGGGCGTCT GCGATCGATC CCGGTGTATG TCGTCGGCAA GGCGATGTCG CCCGGCAGCT ACACGGTGCC CGGCACGTCG ACGATCATCG GCGCGTTGTT CGCGAGCGGC GGCCCCGCGT TCAACGGCTC GATGCGCGCG GTGGCGCTGT ATCGCAATGG CCGGCAGATC GCCGCGCTCG ACGTCTACGG CTTTCTCACG CGCGGCGCGG TGAAGGACGA TGTCCATCTG CTGCCGGGCG ACGTCATCGT CATTCCGCCC GCCGGGCCGC GCGTCGCGCT GACGGGCGCG CTCGACGCGC CCGGCATCTA CGAGCTGCGC AAGACGAGCG AAACGTTGCG CGAGCTGCTC GACGACGCGG GCGGCGTCAC CGCGCTCACG AGCCTCGACC GCGTGATGAT CGAACGGGTG AACCCGGCCG ACGGCGCCGC GCCGCGTTCC GTGCAGGAAG TGCGGCTCGA CGAAGCGGGG CTCGCGACGG TCGTGAAGGA CGGCGACATC GTGACGCTGT CGATGGTGTC GCAGAAATTC TCGAACGCCG TGACGCTGCG CGGCAACGTC GCCGCGGCGC TCAGGTATCC GTACAAACCG GGCATGACGC TCGCCGATTT GCTGCCGTCC CCGGAGGCCG TGCTGACGCC CGACTACTTC ACGCGCAAGA ACATTCTCGT CGAATACGCG AAGAGCGGCG GCGCCGACCG GCGGCCGTTC GACGGCATCC GCAATCTCGT CGACGAGCCC AACTGGCACT ACGCGATCAT TCAGCGGCTC GACCCCGTCA CGCTGACCGA GAACGTGATC GCGTTCAACC TGCGCGCGGT GATGACGAAA GGCAGCGCCG AGGCCGGCAT CGCGCTGCAG CCCGGCGACG TGGTGACGAT TTTCGGCAAG CGGGACCTGC GCAACCCGGT CGACGACAAC AAGAGCCTCG TTCGCGTGGA CGGCGAAGTG CGCGCCCCCG GCGTCTACCA GCTCAACGCG GGCGAATCGC TGCGCGAGCT GCTGCAGCGC GCGGGCGGCC TGACAAGCAA CGCGTATGTG TTCGGCCTCG AGTTCACGCG CGAATCCACC CGCAGCCAGC AGCAGCAGAA CCTGAACGCC GCGCTCGACC GCGCGACGTT GCAGGCGAAC AGCAAGCTCG CCGCGGCGCT CGCGAACCTG CCGAGCGGCG ACACGCAGTA TCTGCAGGCT CAGATGGCGG CCGCGCAGCA GGCGCAACTC GCGCGGCTGC GCGAGCTCAA GCCGACGGGG CGCGTGTCGC TCGAGCTGAG CACGCGCGCG AGCCGCATCG GCGATCTGCC CGATCTGCCG CTGAACGACG GCGATGCGAT TTACGTGCCG CCGGTGCCGG CGTTCGTGAC CGTCTACGGC GCGGTCGACA ATCAGAACGC GGTGATCTGG AAGCTGCATC GAACGGTCGC CGATACGTTG AGGGTCGCGG GCGTCCAGCG GGACATCGCG GACCTCGACG CCGCATTCGT GCTGCGCGCC GACGGCAGCG TCGCGTCGGC GAGCAGCGCC GGCTGGTTCG GCAGCTTCGG CGCGCTCGAG CTGATGCCGG GCGACGCGCT CGTGGTTCCC GAGAAGCTCG ACCGGCGCAC CGCGATGACG AAGTTCCTCG CCGGCCTCAA GGACTGGTCG CAGGTGCTGG CCAATTTCGG CCTGGGCGCG GCGGCAATCA AGGTGCTCAA GTAA
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Protein sequence | MIRRRRADDV LQKARCSIDR KTRSRMNVKS PILRHPRTWA GFSFRDGLPF IRFASLRSLA WLLRCAVCLW PCAFPVFAHA QIVPFVPSAS ASAGADARSA VPLPPIDGLP AVDGLSARQR DALQPPLPGA KLTKDATTKD GLLKDGAALN EPPRPCGPLG CRGEAIDCPP SADGRPTSIT RRADGTPELP DPCGRPRAAS QPALTDFQVF VQQSTGRALP LFGYNFFSTT TTYRSLDNVP VPDDYVLGPG DEVLLHAWGG VAGDQRLVVD RNGQVSIPGV GVVTVAGARA SELDSLLRSG LGRYFTDFNV NAALGRLRSI PVYVVGKAMS PGSYTVPGTS TIIGALFASG GPAFNGSMRA VALYRNGRQI AALDVYGFLT RGAVKDDVHL LPGDVIVIPP AGPRVALTGA LDAPGIYELR KTSETLRELL DDAGGVTALT SLDRVMIERV NPADGAAPRS VQEVRLDEAG LATVVKDGDI VTLSMVSQKF SNAVTLRGNV AAALRYPYKP GMTLADLLPS PEAVLTPDYF TRKNILVEYA KSGGADRRPF DGIRNLVDEP NWHYAIIQRL DPVTLTENVI AFNLRAVMTK GSAEAGIALQ PGDVVTIFGK RDLRNPVDDN KSLVRVDGEV RAPGVYQLNA GESLRELLQR AGGLTSNAYV FGLEFTREST RSQQQQNLNA ALDRATLQAN SKLAAALANL PSGDTQYLQA QMAAAQQAQL ARLRELKPTG RVSLELSTRA SRIGDLPDLP LNDGDAIYVP PVPAFVTVYG AVDNQNAVIW KLHRTVADTL RVAGVQRDIA DLDAAFVLRA DGSVASASSA GWFGSFGALE LMPGDALVVP EKLDRRTAMT KFLAGLKDWS QVLANFGLGA AAIKVLK
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