| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS668_A0393 |
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| Symbol | |
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| ID | 4886407 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 668 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009075 |
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| Strand | - |
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| Start bp | 359935 |
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| End bp | 361596 |
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| Gene Length | 1662 bp |
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| Protein Length | 553 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 640130334 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001061399 |
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| Protein GI | 284159970 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily
[TIGR00880] Multidrug resistance protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.223586 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATTTCT GTGGCAATGA CTTGCAACAG CCGCTCAGCC TAACATGCCG CTCTCCCCTT
CGCATCACGG TGTCCGGCAT GCACGACGCG CCCTCCCGCC CCGCTCCGAT CGAGCCTCCC
CGTCACGCTT GCGGCTCGCC CGCCGCGTCC GCGCCGGCCC GCGCGCGCGC GCTCGCGACC
GCGTCGGCCA CCTGCTCGCT GATCGTGCTC GACACGAACG TCGTCGCCGT ATCGCTGCCG
TCGATCGCCC GTACGTTCCA TGCGAGCTTC GCGGACATCG AATGGGTGGT GAGCGCGTAC
ATGACCGCGT TCGCCGCATG CCTGCTGCCG GCGGGCGGGC TCGCCGACCG CGCGGGCCGC
AAGCGCGTGC TGCTCGCCGG GCTCGCGGTG TTCTTCGTCG CGTCGCTCGG CTGCGGGCTC
GCGCCGTCGG CCGCGCTCCT GAATGTCGCG CGCGCGGTCA AGGGCATCGG CGCCGCGATG
CTGCTGACCT CGGCGCTCGC CGTGATCGCG AACCGCTTCT CCGAAGGCCG CGAGCGAGCG
CGCGCATGGG CGATCTGGGG CATGTGCATG GGCGTCGCGA CGGCGATCGC GCCGCTCGTC
GGCGGCGCGA TCGCGCAATG GATCGGGTGG CGCTGGATCT TCCTGCTGAA CCTGCCGGTG
TGCATCGCGC TCGCCGCGGC CGTTCGCGCG ACGATCGACG AATCGCGCGA TCCGCACGCG
AAACGCATCG ACGCGCCGGG CAGCGTGCTG TTCGGCGCGG CGCTCGCGCT CGGCATCTGG
GCGCTGATCG ACGCGCCGTC GCACGGCTGG ACCGCGCCCG GCACGCTCGC GCGCTTCGCG
GCGAGCGCGG CGCTCGGCGC GGCGTTCGTC GCCGCCGAGC GCTGGCAGCG GCGCCCGATG
ATCGATCTCG CGCTGTTTCG CACGCCGCGC TTCGTCGGCG CGCTGCTCGC GATGTTCGGC
TACGCGGCGT GCGCACAGGT GATGATGACG TTCCTGCCGC TCTATCTGCA GATCGGCTTC
GGGATGTCGG CGATCGACGC GGGGCTCGGC ATGCTGCCGT TCGCGCTCGC GATGATCGTC
GGGCCGTCGC TCGGCGCGGC GCTGTCGGCG CGCGCGCCGG CCGCGACCGT GCTCGGCTGC
GGGCTCGCGC TGATCGGCAT CGGCAATTTC GCGACCGCCG CGCTCGCCGG CGCGTCGCAC
TACGGTCTCG TCGCGCTCGG GATGATGATC ACCGGCTGCG GCGCGGGCAT CCTCAACGGC
GACACCCAGA AGGCGATCAT GGCGTGCGTG CCGCCCGAGC GCACCGGCAT GGCGTCCGGG
ATCAGCACGA CGACGCGGTT TTCCGCGATC GTGACGTCGG TCGGCGTGCT CGGCGCGGTG
CTCGCCGAGC AGACCCACGC GGCGCTCGCC GCACGCGTCG CGCATGCGCC GGCATTGCTC
GGCGCACTCG ATCCGCGCTT CATGTCGAGC CTGCTCGCGG GCGATCTCGC GCAGGCGATA
CGCGGCCTGC CGCCGCGCAC CGGCGCGACG CTCGCGCACA TCGCGCCCGG CGGCTTCGCG
AGCGGTTTTT CGCTCGCGCT GTGCGCGAGC GGCGCGTTCG CGCTCGCGGC GGCCGTGGCG
GTGCGGCTGC TCGTCGGCGC GCAGCCGGGG CGCGCCGCAT GA
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| Protein sequence | MNFCGNDLQQ PLSLTCRSPL RITVSGMHDA PSRPAPIEPP RHACGSPAAS APARARALAT
ASATCSLIVL DTNVVAVSLP SIARTFHASF ADIEWVVSAY MTAFAACLLP AGGLADRAGR
KRVLLAGLAV FFVASLGCGL APSAALLNVA RAVKGIGAAM LLTSALAVIA NRFSEGRERA
RAWAIWGMCM GVATAIAPLV GGAIAQWIGW RWIFLLNLPV CIALAAAVRA TIDESRDPHA
KRIDAPGSVL FGAALALGIW ALIDAPSHGW TAPGTLARFA ASAALGAAFV AAERWQRRPM
IDLALFRTPR FVGALLAMFG YAACAQVMMT FLPLYLQIGF GMSAIDAGLG MLPFALAMIV
GPSLGAALSA RAPAATVLGC GLALIGIGNF ATAALAGASH YGLVALGMMI TGCGAGILNG
DTQKAIMACV PPERTGMASG ISTTTRFSAI VTSVGVLGAV LAEQTHAALA ARVAHAPALL
GALDPRFMSS LLAGDLAQAI RGLPPRTGAT LAHIAPGGFA SGFSLALCAS GAFALAAAVA
VRLLVGAQPG RAA
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