Gene BURPS668_A0160 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBURPS668_A0160 
SymbolsciN 
ID4886582 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia pseudomallei 668 
KingdomBacteria 
Replicon accessionNC_009075 
Strand
Start bp140360 
End bp140992 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content62% 
IMG OID640130101 
ProductSciN protein 
Protein accessionYP_001061166 
Protein GI126444172 
COG category[S] Function unknown 
COG ID[COG3521] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR03352] type VI secretion lipoprotein, VC_A0113 family 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGGGCGAG GCCCGGAGGC TGCTGTTCGC GGCGCTCGTA TCGCGAGCGC CGCGAACAGC 
GGCTTTTCCC GGGGCGACAG GATCATCCAG ATGGCTTTCC CATTTTTCTT TCGCCGCGAA
GCGGCCAGGC AAACCGCCGT CAAGCGCGTT GTGGCGGCAA TGGTATGCGC ATCGCTCGCG
GCTTGCGCAA GCTTGCCGGC ACGCAAGGAA ACAGCCGATC TGATCGTGAA GATCAAGGTG
AGCGAAGGCG CCAATCCGGA TGAGCATCAG CGCCCGGCGC CCGTGATGGT GCGGCTGTAC
GAGCTGAAAT CGGCCGGCGC GTTCGAGAAC GCCGATTTTT TCACGCTACA GAGCGACAGC
CGCAAGGTGT TGGGTGACGA CGCGATCGCG ACGGATGAAT TCGTGATGCG CCCGGGCGAC
ACCCGGGATA TTCATCGGCG TGCCGATTCC GCGGGGACGT CGATCGGCGT GCTGGTCGGT
TATCGAGAGC TCGGCAAATC GGTGTGGCGG GCGGTCCATA AGCTGCGGCC GGCTCCGGAG
GATGCATGGT ACCGGGCATT CACGCCAAGG ACGAAAATCA AGTTGAACGT CGATGTCGGG
CAGCAGACGG TGACGATTAC AGAATTGGAA TGA
 
Protein sequence
MGRGPEAAVR GARIASAANS GFSRGDRIIQ MAFPFFFRRE AARQTAVKRV VAAMVCASLA 
ACASLPARKE TADLIVKIKV SEGANPDEHQ RPAPVMVRLY ELKSAGAFEN ADFFTLQSDS
RKVLGDDAIA TDEFVMRPGD TRDIHRRADS AGTSIGVLVG YRELGKSVWR AVHKLRPAPE
DAWYRAFTPR TKIKLNVDVG QQTVTITELE