| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS668_A0152 |
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| Symbol | |
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| ID | 4888439 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 668 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009075 |
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| Strand | + |
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| Start bp | 131470 |
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| End bp | 134214 |
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| Gene Length | 2745 bp |
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| Protein Length | 914 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640130093 |
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| Product | fimbrial usher protein |
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| Protein accession | YP_001061158 |
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| Protein GI | 126445438 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3188] P pilus assembly protein, porin PapC |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGATCG CCGCTGGAGC AGTTGCATGC GGCGTTGGAT CGTTGTGCAT GCCGGTCGTC
GCGGCGGAAT TCGACGGCAC GCGAACGGGC GAACAATCGC GCCCGGATGC AATGGGCGAG
GCGCCGTCTG GCGCAGAGCC GGGGGCGCGT GGCCGGCAAG CCTTGCTGGT CGCGTCCCAT
GCATCCCCGT CAGCGCCAAC GACGGTCTCG TTCAATTCGC GCCTGCTCAT GGGCGGCGGA
ATCGATCTGT CGCGCTTCGA GCGAGGCAAT CCCGTAGTGG CCGGCATTTA CCCGGTCGAC
GTGACAGTCA ACGGCGAACG ACGCGGGCGG ATGGACGTCG AGTTTCGCGA CGTCCGCGGC
GGCGACAGTG CGGCGCCATG CTTTACGCGC GCGATGCTGG ATCGGCTCGG CGTGGAAGGC
GACATCGTCG CCAAGCGCCT CGATGCCGCG CGCGACGCGA CGGGCGCGGC ATCGGGCCAG
ACGCCGACGC TTTCCGCGAG CGCTTGCATC GGCTTGCGCG ATGCGCTGCC TGATGCGACG
TATACGCTCG ACAGCGCCGA CCTCACGCTC GATCTGACGA TCCCGCAGGT GGACATGCGC
AAGACCGCGC GCGGCTACGT GGACCCGTCC CGGTGGGACA ACGGCGTCAA CGCCGGACTG
CTGCAGTACA ACCTCAGCGG CTACGCGAGC GAAAACAAGT TCTTCGGGAG CCATGCGAGC
AGCCTCTTTC TCGGTTTGCA AGCGGGCGCG AATATCGGGG CTTGGCGTGT TCGTCAACGT
TCGAACCTGA TGTGGGCAAA CCGCAGCGCC GGCATGAGCT GGCGCAGCCT CGAAACCTAC
GTTCAACGGG ACATCACGGC GTTGCGCAGC CAGATCACGC TCGGCGACAG TTACACGACC
GGCGAGATCT TCGAGTCGTT CGGTGTGCGT GGCATGCAAC TGGCAAGCGA TGACCGGATG
TTGCCGGTTT CGCTGCAGTC CTATGCGCCG ACGGTTCGCG GCGTCGCGGA TACGAACGCG
CGCGTGGCCG TGCGCCAGCG CGGCAACGTG ATTTACGAGG CCAGCGTTCC GCCCGGACCG
TTCGAATTCG ACGACTTGCC GCCGACCGGC TACGGCGGCG ATCTCGATGT GACGATCACC
GAATCGGACG GCAGAACGAA ACATTTCACG GTGCCTTTCG CATCGGTGCG TCAACTCCTG
CGGCCCGGCA TGCAGCGCTT CAACTTCACC GTCGGCCAGT ATCGAGATGC GCTGTCGAAC
GGCAAGCCGT GGGTCGCGCA ACTGACCTAT CAGCGCGGCA TGACGAATTT GCTGACCGGC
TATGCAGGTC TGCTGTCGTC GACGGGTTAC GCGTCAGGCC TGATCGGCGT CGCGCTCAAC
ACGCCGATCG GCGCTTTCGC TTTCGATGTC ACGTCCGCGC GCACCCATTT GCCCGGGCAA
GGCGTGCGCA ACGGATTCAG CTCGCATCTG TCGTACAGCA AGATGGTGCC GTCCACCGGA
ACCCATTTCT CCATGGCGGC GTACCGATAT TCGACGGCGA ATTACTACAG TCTCGCCGAC
GCCGTTACCG CGCGCTACGG CTACAACGCG GAAGAGCGCG CATGGCGAAA CGACTATCGG
GCGCGCACGC GATTGCAGCT GAACGTCAAT CAGCGGATCG GAGACCGGAG CTCCGCCTAT
GTTTCGAGCA GTCTGCTGAA TTATTGGGAC GGCCGTGGAC GGGACATTCA GTTTCAGGCG
GGATTTTCAA GCGTCTTCAA GCGCGTCTCG TATACGGTCT ACGCCCAGCG CAGCCGCTCG
AGCGACGATC GCACCGTTAC GCAGGTTGGC GTGAATTTGT CGATTCCGCT TGGCAGCGGC
GCTTATACGA AGAGAAATGC GTTCAGTTCT CTGACGACTT CGCTGTCGCG CGCGTCCAAC
GGCGACAGTT CGATTCAGGC GAATCTGTCG GGCAGCACGG CGCACGTGGT GCCGATCGAC
TACGGCGTCA ACGTGTCGCG CTCGGTTACC GGCGACAGCA ATTTCGCATC GCTTGGGGTC
TATGGCACTT ATCGCTCGCC GTTCGGCACG TACAGCGGCA ACGCATCGGT CGACAATCGA
GCGCGTCAGG CGTCGTTCGG CGCGAACGGG GCGGTGGTCC TGCATCGCGG CGGCGTGACG
TTGAGCCCGC CGCTCGGATC TGCGGCGGCG CTCGTCGAGG CGAAAGGCGC GAGAGGCGGC
AAGCTGATCA ACGGGCAGGG CGCGACGATC GATCGCTTCG GCTACGCGGT GATTCCTTCG
TTGATGCCGT ATCGAGCCAA CACCGTCGCC ATCGATCCGT CCGAGCTGCC GGACGACGTC
GAACTCGCGA ATACGAGCGA GGAGGTCGTG CCTCGCAACA ATTCGATCGT CTTCGTGAAG
ATGGAAACCA AGCGCGGCAG GCCGGTCTTC GCCGCGACCG AAACCGAAGA CGGCAAACCC
CTGCCGATGG GCAGCGAGCT GTTCGACGTC GAGGGCAAGT CGCTCGGCGG CGTGGGTCAA
GGCGGCATGG CGTTTCTGCG CGGTCTCCAG GGCGCCGGCA ATGTGGTCGC GAAGTGGGGG
GCGGGTGCGT CCGAGCAATG CACGATGCCC TACCTGGTGC CGGCGGATCA GGCGCAAGCG
AAGCAATCAC GGGCGATCGT TCGCATCCGC TTGCGTTGCG AGCCGCGATT GAGCGCCGAC
GCGAGCCAGA CGCCGGACGG CGATGGCGGA ACACGGAATG ATTGA
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| Protein sequence | MMIAAGAVAC GVGSLCMPVV AAEFDGTRTG EQSRPDAMGE APSGAEPGAR GRQALLVASH
ASPSAPTTVS FNSRLLMGGG IDLSRFERGN PVVAGIYPVD VTVNGERRGR MDVEFRDVRG
GDSAAPCFTR AMLDRLGVEG DIVAKRLDAA RDATGAASGQ TPTLSASACI GLRDALPDAT
YTLDSADLTL DLTIPQVDMR KTARGYVDPS RWDNGVNAGL LQYNLSGYAS ENKFFGSHAS
SLFLGLQAGA NIGAWRVRQR SNLMWANRSA GMSWRSLETY VQRDITALRS QITLGDSYTT
GEIFESFGVR GMQLASDDRM LPVSLQSYAP TVRGVADTNA RVAVRQRGNV IYEASVPPGP
FEFDDLPPTG YGGDLDVTIT ESDGRTKHFT VPFASVRQLL RPGMQRFNFT VGQYRDALSN
GKPWVAQLTY QRGMTNLLTG YAGLLSSTGY ASGLIGVALN TPIGAFAFDV TSARTHLPGQ
GVRNGFSSHL SYSKMVPSTG THFSMAAYRY STANYYSLAD AVTARYGYNA EERAWRNDYR
ARTRLQLNVN QRIGDRSSAY VSSSLLNYWD GRGRDIQFQA GFSSVFKRVS YTVYAQRSRS
SDDRTVTQVG VNLSIPLGSG AYTKRNAFSS LTTSLSRASN GDSSIQANLS GSTAHVVPID
YGVNVSRSVT GDSNFASLGV YGTYRSPFGT YSGNASVDNR ARQASFGANG AVVLHRGGVT
LSPPLGSAAA LVEAKGARGG KLINGQGATI DRFGYAVIPS LMPYRANTVA IDPSELPDDV
ELANTSEEVV PRNNSIVFVK METKRGRPVF AATETEDGKP LPMGSELFDV EGKSLGGVGQ
GGMAFLRGLQ GAGNVVAKWG AGASEQCTMP YLVPADQAQA KQSRAIVRIR LRCEPRLSAD
ASQTPDGDGG TRND
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