Gene BURPS668_A0071 details

Gene Information

• Locus tag: BURPS668_A0071
• Symbol: pcaC
• ID: 4885875
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia pseudomallei 668
• Kingdom: Bacteria
• Replicon accession: NC_009075
• Strand: +
• Start bp: 60393
• End bp: 60779
• Gene Length: 387 bp
• Protein Length: 128 aa
• Translation table: 11
• GC content: 64%
• IMG OID: 640130012
• Product: 4-carboxymuconolactone decarboxylase
• Protein accession: YP_001061077
• Protein GI: 126442829
• COG category: [S] Function unknown
• COG ID: [COG0599] Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit
• TIGRFAM ID: [TIGR00778] alkylhydroperoxidase AhpD family core domain; [TIGR02425] 4-carboxymuconolactone decarboxylase

Plasmid Coverage information

• Num covering plasmid clones: 30
• Plasmid unclonability p-value: 0.499909
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAACGACG ATCAACGTTA CGAAGCGGGC ATGAACGTGC GCCGCGCGGT GCTCGGCGAT 
GCGCACGTCG ACCGGTCGCT CGCGAACCGC ACCGATCTGA CCGATGAATT CCAGAACCTG 
ATCACGCGCT ATGCGTGGGG CGAGATCTGG ACGCGCGCCG GCTTGCCGCG CCATACGCGC 
AGCTTGCTGA CGATCGCGAT GATGGTCGCG CTCAACCGTG GCGAGGAGCT TGCGCTGCAT 
CTGCGCGCGG CGAAGAACAA CGGCGTGACG CGCGACGAGA TCAAGGAAGT GCTGCTGCAG 
ACAGCGATCT ACTGTGGCGT GCCCGTGGCG AATTCGGCGT TTCATCTCGC GCAGCGCATC 
TTCGGCGAAG AAGACTCGGC GAGCTGA 

 

Protein sequence

MNDDQRYEAG MNVRRAVLGD AHVDRSLANR TDLTDEFQNL ITRYAWGEIW TRAGLPRHTR 
SLLTIAMMVA LNRGEELALH LRAAKNNGVT RDEIKEVLLQ TAIYCGVPVA NSAFHLAQRI 
FGEEDSAS