Gene BURPS668_3967 details

Gene Information

• Locus tag: BURPS668_3967
• Symbol: atpC
• ID: 4884724
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia pseudomallei 668
• Kingdom: Bacteria
• Replicon accession: NC_009074
• Strand: -
• Start bp: 3872275
• End bp: 3872700
• Gene Length: 426 bp
• Protein Length: 141 aa
• Translation table: 11
• GC content: 64%
• IMG OID: 640129895
• Product: F0F1 ATP synthase subunit epsilon
• Protein accession: YP_001060960
• Protein GI: 126438987
• COG category: [C] Energy production and conversion
• COG ID: [COG0355] F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit)
• TIGRFAM ID: [TIGR01216] ATP synthase, F1 epsilon subunit (delta in mitochondria)

Plasmid Coverage information

• Num covering plasmid clones: 34
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCAACCA TCAAAGTAGA CGTCGTCAGC GCCGAAGAGC AAATCTTCTC GGGCCAGGCG 
AAGTTCGTCG CGCTGCCGGG CGAAGCCGGT GAACTGGGCA TCCTGCCCGG CCACACGCCG 
CTCATCACCC GGATTCGTCC GGGTGCGGTG CGCATCGAGT CGGAAAGCGG CGACGAAGAG 
TTCGTGTTCG TCGCGGGCGG CATTCTCGAA GTGCAACCGG GCGCCGTGAC GGTGCTCGCC 
GATACCGCGA TCCGCGGCAA GGATCTCGAC GCGGCGAAAG CCGAGGAAGC GAGAAAGCGC 
GCGGAGGAAA CGCTGCAGAA CGCGAAGTCG GACATCGATC TCGCAAAAGC ACAGTCGGAA 
CTCGCCACCG CGATGGCGCA ACTCGAAGCG ATCCAGCGTC TCGCGAAGAT CCGCGGCAAG 
CACTGA 

 

Protein sequence

MATIKVDVVS AEEQIFSGQA KFVALPGEAG ELGILPGHTP LITRIRPGAV RIESESGDEE 
FVFVAGGILE VQPGAVTVLA DTAIRGKDLD AAKAEEARKR AEETLQNAKS DIDLAKAQSE 
LATAMAQLEA IQRLAKIRGK H