Gene BURPS668_3684 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBURPS668_3684 
Symbol 
ID4884081 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia pseudomallei 668 
KingdomBacteria 
Replicon accessionNC_009074 
Strand
Start bp3602898 
End bp3604664 
Gene Length1767 bp 
Protein Length588 aa 
Translation table11 
GC content67% 
IMG OID640129612 
ProductABC transporter, permease/ATP-binding protein 
Protein accessionYP_001060688 
Protein GI126441815 
COG category[R] General function prediction only 
COG ID[COG4178] ABC-type uncharacterized transport system, permease and ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTCAAT CGATGCAAGC CTCAGCCCCC GCCCCGGACG ACCCGACGCA ACCCCAGCCC 
TCGGTATCCA CGTGGAGCCT CATCAAGCCC TATTGGGTCT CCGAGGAATG GAAGGTCGCG
TGGGGATTGC TCGTCACGAT CGTCGCGATC AATCTCACGC TCGTATGGAT CAACGTACGG
ATCAACTCGT GGAGCGCGTC GTTCTACAAC GCGCTGCAAT CGAAGGACGT GCGCGACTTC
CCGAGCCTGC TGATCACGTT CGCCGTGCTC GCGTTCGCGT TCATCATCCT CGCGGTGTAC
GGCCTCTATC TGCGGCAGAT GCTCGGGTTC CGCTGGCGGC AGTGGCTCAC GACGCGCTTC
CTGAACGAAT GGCTCGGCGA CCGCAACTTC TACCGGATCG AGCGCGACCG GCTCGCCGAC
AACCCCGACC AGCGGATCGC GGACGACTTG CAGTCGCTCG CGTCGACGAC GCTGTCGCTG
TCGCTCGACC TGCTGTCGAC GGTCGTCACG CTGATCTCGT TCGCGACGAT CCTCTGGTCG
ATCGCCGGCG CGGCGACGAT CTCGCTCGGC GGCCACGCGA TCACGATTCC CGGCTACATG
GTGTGGGTCG CGATGATCTA TGCGATCGCG GGCTCGTACG TGATGCACCG CTTCGGCCAT
CCGCTCGTGT CGATCAACTA CCAGCAGCAG CGCGTCGAGG CGGACTTCCG CTTCAGCCTG
ATCCGCATCC GCGAGAACGC CGAGCAGATC GCGTTCTACA ACGGCGAGCC CGTCGAGACC
GCGCACGAGC AGGGCCTGTT CCAGCGCATC CGCGAAAACT GGTGGCGCGT GATGCGCTAC
ACGAAGCGGC TCACGTTCGT GCTGAACTTC TACGCGCAGC TCGCGAGCCT CTTTCCGATC
GCGGTCGCCG CGCCGCGCTA CTTCGCGGGC GCGTTCACGT TCGGCGTGCT GATGCAGATC
AGCCGCGCGT TCGGCACCGT CAGCGATTCG TTTTCGTGGT TCATCAACAG TTACGGCACG
CTCGCCGAGT GGCGCGCGAC CGTCAACCGT CTGCGCGAAT TCAAGCGCGT GATGGGCGCG
TCGCACCTGA AGGAAACGAT GTCGCCCGCC ACCGAGCACG GCGGCATCAA CCTGCATTAC
GTCGACGCGC GGCAGATCAC GACGTCGAGC CTGAAGCTCG CGCTGCCGAA CGGCGCGGCG
CTCGCGTCGA TCAGCGACGT CGCGATCGAG CCCGGCTCGC GCTGGCTCGT ACGCGGACCG
TCCGGCTCCG GCAAGAGCAC GCTGATGCGC GCGCTCGCGG GCCTCTGGCC GTTCGGCGAC
GGCGCGATCG ACGCGCCCGT CGACGCGCGG ATGATGTTCG TTCCGCAGCA GAGCTACTTG
CCGATCGGCA CGCTGAAGGC GGCGCTCGCG TATCCGTCGG CCACCGATAC GTTCAGCGAC
GACGCGTGCA GCGAAGCGCT GCGCGCGTGC GGCCTCGCCG ACTACGTCGA GCGGCTCGGC
GAGACGGGCC ACTGGACGCG CATCCTGTCG CCCGGCGAGC AACAGCGCCT CGCGGGCGCG
CGCGTGCTGC TGCACAAGCC CGACTACCTG TTCCTCGACG AAGCGACGAG CGCGCTCGAT
GCCGACAACG AAGCGCGCCT CTATCGGCTC TTCGACGAGC GGCTGCCGAA GGCGGCGATC
GTCAGCATCG CGCATCGCGA ATCGGTCGCA TCGTTCCATC AGCAGACGCT CGACGTGCGC
CGCGACGAGG CGCGGGTTGC CGCGTGA
 
Protein sequence
MTQSMQASAP APDDPTQPQP SVSTWSLIKP YWVSEEWKVA WGLLVTIVAI NLTLVWINVR 
INSWSASFYN ALQSKDVRDF PSLLITFAVL AFAFIILAVY GLYLRQMLGF RWRQWLTTRF
LNEWLGDRNF YRIERDRLAD NPDQRIADDL QSLASTTLSL SLDLLSTVVT LISFATILWS
IAGAATISLG GHAITIPGYM VWVAMIYAIA GSYVMHRFGH PLVSINYQQQ RVEADFRFSL
IRIRENAEQI AFYNGEPVET AHEQGLFQRI RENWWRVMRY TKRLTFVLNF YAQLASLFPI
AVAAPRYFAG AFTFGVLMQI SRAFGTVSDS FSWFINSYGT LAEWRATVNR LREFKRVMGA
SHLKETMSPA TEHGGINLHY VDARQITTSS LKLALPNGAA LASISDVAIE PGSRWLVRGP
SGSGKSTLMR ALAGLWPFGD GAIDAPVDAR MMFVPQQSYL PIGTLKAALA YPSATDTFSD
DACSEALRAC GLADYVERLG ETGHWTRILS PGEQQRLAGA RVLLHKPDYL FLDEATSALD
ADNEARLYRL FDERLPKAAI VSIAHRESVA SFHQQTLDVR RDEARVAA