| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS668_3253 |
|---|
| Symbol | |
|---|
| ID | 4883374 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 668 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009074 |
|---|
| Strand | - |
|---|
| Start bp | 3187586 |
|---|
| End bp | 3189133 |
|---|
| Gene Length | 1548 bp |
|---|
| Protein Length | 515 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 640129181 |
|---|
| Product | capsule polysaccharide exporter |
|---|
| Protein accession | YP_001060264 |
|---|
| Protein GI | 126438767 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG3524] Capsule polysaccharide export protein |
|---|
| TIGRFAM ID | [TIGR01010] polysaccharide export inner-membrane protein, BexC/CtrB/KpsE family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.51682 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATGGCG TTGCATTCGC TGACTTCTTT TCTGGTAATG ACTTGCCGAT GCTGGAATCG
GTCATTGCTG TTTCGAACCC GCAAGCGGCG CTTGCCCGTG CCAGGGAGCG TTATTCCGAT
TGTTCGCCCG CGATAGATAC GCCGACTGCT TTGGGATATG TATTCAATTC GTGGCGTTTC
CTGCTCGAAA CCGGCGACGG TCAGGTGCGC CTGCGCATTC AATCGGAATT CGAGGGTACG
GACCTCGAGC ATCGCCAACT CGTCTTGAGA TATTTGCTGA CCGATGCGCG CGCATCGTCC
ATTTCCGTCG ACGAATTGCT TCCCGCGTCA TCGCCATACT CGGTGGACGC GGCGGAACTG
GTTGATAATC CTTCGTCCGT CGTGTCGAAA CGAACCACCA TGGAGAGCTT CGATGCTCCG
GCGCAGGAGT CGTCATGGTT CTGGCGGGTA TGGACGATCG GGCGGCTGAG GCTGACCCCG
TTGTTTCTGG TGACGGTGGT GCTGCCGACT GCAATCGCTA CCCTCTACTA TGGGCTGATT
GCGTCGGATG TCTACATCTC GGAATCGCAG TTTATCTTGC GTACGCCCAA GCGAACGAGC
GAACCGGGTT TGGGGGCATT GCTTCAGGGC GTCTCCCTAT CAAAGACCAG TGACGACACC
AGTGTCGTTC AAGATTACAT AAAGTCGAGA GACGCACTCG TCGTTCTCGA GCAGAAAATG
CCGCTCAGAG ATGCATTTGG CGGTCGCTAT GCTGATATCT TCAGTCGATT CCCGGGCGTG
ATCGGGCGCG ATGGCTTCGA GTATTTCTAC CGCTATTTCA AAAACCATGT TGCCGTCGAC
GTAGGGACTG CAACTGCGGT CACTACGCTA CGCGTTCAGG CCTATACGTC GAAAGACGCA
TACCTGATCA ACAAGTATTT GCTCGAGATG GCGGAGAAGC GAGTCAATGA ACTCAACGAT
CGCTCACGTC AGGATTCGCT CCGTTACGCC CTTGCGGAGG TGGCGGGAGC GGAAGCGAAG
GTAAAGGCTG CGTCGACGGC GTTGTCGAAA TTCCGAAGCA AGGCGAGTCT GTTCGATCCG
GATCGGCAGT CCAATATCCA ACTGGAACTG GTAGCGAAGT TGCGGGGCGA GCTCATTGCC
AAGCAGGCGC AGCTATCGCA ATTGCGCATG CTCAGCCCGC AGAATCCGCA GATCCCGAGT
CTGGCCGCGT CTATCGGCGC GTTGGAAGCG TCGATTGCGA GCGAGAAAGG GGGCGTGGCG
GGAGAGAAGA ATTCGTTGTC GGACCGTTCG GTCGAGTACC AGCGCCTGGC TTTGGAGCAA
TCGTTCGGGG AGAAGCTTCT TGCCTCTGCG CTGACATCGT TGGAGCAAGC CAGGGCAGAT
GCGGAAAGAA AACAAATCTA TCTGGAACGG GTTGCGGAAC CGAACGAACC GGACGTGGCG
ATGGAACCCA AGCGTGTCCG GAACATATTT GCCTGTTTCA TTTTGGGGCT CGCGGCCTGG
GGCGTGTTGA GCATGCTGGT AGCGGGTATT CGTGAACATC AGGAATGA
|
|---|
| Protein sequence | MNGVAFADFF SGNDLPMLES VIAVSNPQAA LARARERYSD CSPAIDTPTA LGYVFNSWRF
LLETGDGQVR LRIQSEFEGT DLEHRQLVLR YLLTDARASS ISVDELLPAS SPYSVDAAEL
VDNPSSVVSK RTTMESFDAP AQESSWFWRV WTIGRLRLTP LFLVTVVLPT AIATLYYGLI
ASDVYISESQ FILRTPKRTS EPGLGALLQG VSLSKTSDDT SVVQDYIKSR DALVVLEQKM
PLRDAFGGRY ADIFSRFPGV IGRDGFEYFY RYFKNHVAVD VGTATAVTTL RVQAYTSKDA
YLINKYLLEM AEKRVNELND RSRQDSLRYA LAEVAGAEAK VKAASTALSK FRSKASLFDP
DRQSNIQLEL VAKLRGELIA KQAQLSQLRM LSPQNPQIPS LAASIGALEA SIASEKGGVA
GEKNSLSDRS VEYQRLALEQ SFGEKLLASA LTSLEQARAD AERKQIYLER VAEPNEPDVA
MEPKRVRNIF ACFILGLAAW GVLSMLVAGI REHQE
|
|---|
| |